Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is ohr [C]
Identifier: 15888188
GI number: 15888188
Start: 848853
End: 849275
Strand: Direct
Name: ohr [C]
Synonym: Atu0847
Alternate gene names: 15888188
Gene position: 848853-849275 (Clockwise)
Preceding gene: 159184495
Following gene: 159184496
Centisome position: 29.87
GC content: 62.17
Gene sequence:
>423_bases ATGCCCATTCTCTACACGACCAAAGCATCCGCCACCGGTGGTCGCGCCGGCAACGCCAAGTCGGAAGACGGCGTTCTCGA CGTCACGCTCACCGTTCCGAAGGAACTGGGCGGCGATGGCGCCCGTGGCACCAATCCGGAACAGCTTTTCGCGGCCGGTT ATTCCGCCTGCTTCCTCGGCGCCTTGAAGGCTGTTGCCGGCAAGCACAAGGTAAAGATTCCGGAAGACACGACTGTGACG GCAACCGTCGGTATCGGCCCGCGCGAAGACGGCACCGGCTTCGGCATCGAAGTGACGCTGAAGGTCAACATTCCCGGTCT TGAGCGTGAGAAAGCCGAAGAACTTGTCGCCGCCGCACACATCGTTTGCCCATACAGCCACGCCATGCGCACCTCTACGG AAGTGCCGGTCTCGGTGGCCTGA
Upstream 100 bases:
>100_bases TCGCAAAAAACAAATCGTCATTCAATGTGCAAAACTATATTGCGTACAATTTAATTGTACGCTATAAGGCTTCCAACATC AACCCGAAGGAGTAAATGCC
Downstream 100 bases:
>100_bases TAAAGCGGGCTTACGCGCCTGATTATAAATCTTGGGGCCGGGTTTATCCCGGCCTTCTTGTTTACAGAAAGAAATATGCT ATATTCTTTCCAAGGAAAGG
Product: organic hydroperoxide resistance protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MPILYTTKASATGGRAGNAKSEDGVLDVTLTVPKELGGDGARGTNPEQLFAAGYSACFLGALKAVAGKHKVKIPEDTTVT ATVGIGPREDGTGFGIEVTLKVNIPGLEREKAEELVAAAHIVCPYSHAMRTSTEVPVSVA
Sequences:
>Translated_140_residues MPILYTTKASATGGRAGNAKSEDGVLDVTLTVPKELGGDGARGTNPEQLFAAGYSACFLGALKAVAGKHKVKIPEDTTVT ATVGIGPREDGTGFGIEVTLKVNIPGLEREKAEELVAAAHIVCPYSHAMRTSTEVPVSVA >Mature_139_residues PILYTTKASATGGRAGNAKSEDGVLDVTLTVPKELGGDGARGTNPEQLFAAGYSACFLGALKAVAGKHKVKIPEDTTVTA TVGIGPREDGTGFGIEVTLKVNIPGLEREKAEELVAAAHIVCPYSHAMRTSTEVPVSVA
Specific function: Unknown
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
None
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR019953 - InterPro: IPR003718 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: NA
Molecular weight: Translated: 14393; Mature: 14261
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPILYTTKASATGGRAGNAKSEDGVLDVTLTVPKELGGDGARGTNPEQLFAAGYSACFLG CCEEEECCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCHHHHHHHCHHHHHHH ALKAVAGKHKVKIPEDTTVTATVGIGPREDGTGFGIEVTLKVNIPGLEREKAEELVAAAH HHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH IVCPYSHAMRTSTEVPVSVA EECCCHHHHCCCCCCCEEEC >Mature Secondary Structure PILYTTKASATGGRAGNAKSEDGVLDVTLTVPKELGGDGARGTNPEQLFAAGYSACFLG CEEEECCCCCCCCCCCCCCCCCCEEEEEEECCHHCCCCCCCCCCHHHHHHHCHHHHHHH ALKAVAGKHKVKIPEDTTVTATVGIGPREDGTGFGIEVTLKVNIPGLEREKAEELVAAAH HHHHHCCCCEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHH IVCPYSHAMRTSTEVPVSVA EECCCHHHHCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9226277 [H]