Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is erfK [C]
Identifier: 159184495
GI number: 159184495
Start: 847373
End: 848146
Strand: Direct
Name: erfK [C]
Synonym: Atu0845
Alternate gene names: 159184495
Gene position: 847373-848146 (Clockwise)
Preceding gene: 159184494
Following gene: 15888188
Centisome position: 29.82
GC content: 62.14
Gene sequence:
>774_bases ATGTACAGCGGCGATATAGCCGTTCGAAATGTGGGACAATCCGGCCTTATGACAAGCACCGACACAGATCTTTCCAGACG TACTTTTCTTTCCCTTCTGGGTATTTCCTCCGCTTCATTGCTGGCCGGCTGCGCGTCCTCCGGCACGGGTGAAGCCATTC GCCAGCAGGCGAGCAGCATCGGCAGCGATTTCCGCCAGATGTTCTCGTCAGGCGTCAGCGATGCGGAACTGGCCGTCATG TACGGCTCGGTCGAGGATGGCGGTTACGTCATTCCCGCGGTTCCCTATCAGAAGATCGACCGCCGCTATTATCGCCAGCG GGTCGTCGACCCGACCGGCGAACGCCCCGGCACCGTCGTCGTCGATACGCGCTCGCGCTTCCTTTATGTCGTGGAGCAGG GCGGCAGCGCCATGCGCTACGGCGTCGGCATCGGCCGCGATGGTTTCGCCTGGTCGGGCGAAGGTGTCATCCAGTGGCGC CAGAAATGGCCGAAATGGACCCCGCCGGATGAAATGGTCGCCCGCCAGCCGGAACTGGTCAAATATTCCTCCAAGAATGG CGGCATGCCGCCGGGCCTGAAAAACCCGCTCGGTGCCCGCGCGCTCTATATCTTCCAGAACGGCAAGGATACGCTCTACC GCCTGCACGGCTCGCCGGAATGGAACTCCATCGGCAAGGCCGTCTCCTCCGGTTGCGTGCGCCTGATGAACCAGGACGTC ATCGACCTCTACGACCGCGTGCCGCAGAAGGCGCGTGTGGTGGTGTGGCAGTAA
Upstream 100 bases:
>100_bases AAAGAAAGAGATGCGGGCGTCGTTCTGCCAGCGCCTTCCGACTGGCTTTTAGCGGTCGGTTAACTATTTTCGCAATACGC CTGTACACGTGGAACAAACG
Downstream 100 bases:
>100_bases GCCGAAAACTCCTCGCATAAAAAGGCGGCCTCGTGCCGCCTTTCTCTTTTTCGGCCTATGGCCGGGAGAGACCTTCCTTC AGCGCATTCACCTGATCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: ErfK/YbiS/YcfS/YnhG; ErfK/YbiS/YcfS/YnhG Family; ErfK/YbiS/YcfS/YnhG Family Protein/Tat Domain Protein; ErfK/YbiS/YhnG Oxidoreductase; Twin-Arginine Translocation Pathway Signal; Protein Ybis; ErfK/YbiS/YcfS/YnhG Superfamily; Carnitine Operon Oxidoreductase; Carnitine Operon Oxidoreductase CaiA; ATP Synthase Subunit; Protein ErfK/SrfK; ErfK/YbiS/YhnG Protein; Exported ErfK/YbiS/YhnG Family Protein; Signal Peptide Protein; Exported ErfK/YbiS/YhnG Protein; ErfK/YbiS/YhnG Family Protein
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MYSGDIAVRNVGQSGLMTSTDTDLSRRTFLSLLGISSASLLAGCASSGTGEAIRQQASSIGSDFRQMFSSGVSDAELAVM YGSVEDGGYVIPAVPYQKIDRRYYRQRVVDPTGERPGTVVVDTRSRFLYVVEQGGSAMRYGVGIGRDGFAWSGEGVIQWR QKWPKWTPPDEMVARQPELVKYSSKNGGMPPGLKNPLGARALYIFQNGKDTLYRLHGSPEWNSIGKAVSSGCVRLMNQDV IDLYDRVPQKARVVVWQ
Sequences:
>Translated_257_residues MYSGDIAVRNVGQSGLMTSTDTDLSRRTFLSLLGISSASLLAGCASSGTGEAIRQQASSIGSDFRQMFSSGVSDAELAVM YGSVEDGGYVIPAVPYQKIDRRYYRQRVVDPTGERPGTVVVDTRSRFLYVVEQGGSAMRYGVGIGRDGFAWSGEGVIQWR QKWPKWTPPDEMVARQPELVKYSSKNGGMPPGLKNPLGARALYIFQNGKDTLYRLHGSPEWNSIGKAVSSGCVRLMNQDV IDLYDRVPQKARVVVWQ >Mature_257_residues MYSGDIAVRNVGQSGLMTSTDTDLSRRTFLSLLGISSASLLAGCASSGTGEAIRQQASSIGSDFRQMFSSGVSDAELAVM YGSVEDGGYVIPAVPYQKIDRRYYRQRVVDPTGERPGTVVVDTRSRFLYVVEQGGSAMRYGVGIGRDGFAWSGEGVIQWR QKWPKWTPPDEMVARQPELVKYSSKNGGMPPGLKNPLGARALYIFQNGKDTLYRLHGSPEWNSIGKAVSSGCVRLMNQDV IDLYDRVPQKARVVVWQ
Specific function: Unknown
COG id: COG1376
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788299, Length=152, Percent_Identity=32.2368421052632, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1787040, Length=156, Percent_Identity=30.1282051282051, Blast_Score=64, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28203; Mature: 28203
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSGDIAVRNVGQSGLMTSTDTDLSRRTFLSLLGISSASLLAGCASSGTGEAIRQQASSI CCCCCEEEEECCCCCCEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH GSDFRQMFSSGVSDAELAVMYGSVEDGGYVIPAVPYQKIDRRYYRQRVVDPTGERPGTVV HHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEE VDTRSRFLYVVEQGGSAMRYGVGIGRDGFAWSGEGVIQWRQKWPKWTPPDEMVARQPELV EECCCEEEEEEECCCCEEEECCCCCCCCCEECCCCCHHHHHHCCCCCCCHHHHHCCCHHE KYSSKNGGMPPGLKNPLGARALYIFQNGKDTLYRLHGSPEWNSIGKAVSSGCVRLMNQDV EECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHH IDLYDRVPQKARVVVWQ HHHHHCCCCCCEEEEEC >Mature Secondary Structure MYSGDIAVRNVGQSGLMTSTDTDLSRRTFLSLLGISSASLLAGCASSGTGEAIRQQASSI CCCCCEEEEECCCCCCEECCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHH GSDFRQMFSSGVSDAELAVMYGSVEDGGYVIPAVPYQKIDRRYYRQRVVDPTGERPGTVV HHHHHHHHHCCCCCCEEEEEEECCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCEEE VDTRSRFLYVVEQGGSAMRYGVGIGRDGFAWSGEGVIQWRQKWPKWTPPDEMVARQPELV EECCCEEEEEEECCCCEEEECCCCCCCCCEECCCCCHHHHHHCCCCCCCHHHHHCCCHHE KYSSKNGGMPPGLKNPLGARALYIFQNGKDTLYRLHGSPEWNSIGKAVSSGCVRLMNQDV EECCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHH IDLYDRVPQKARVVVWQ HHHHHCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA