Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184496
Identifier: 159184496
GI number: 159184496
Start: 849385
End: 849768
Strand: Direct
Name: 159184496
Synonym: Atu0848
Alternate gene names: NA
Gene position: 849385-849768 (Clockwise)
Preceding gene: 15888188
Following gene: 159184497
Centisome position: 29.89
GC content: 63.28
Gene sequence:
>384_bases ATGAATATTCACGCCAAGACCGCCATGGATCCCGCATCGCAGGGCAGGGTCGTCACCAAGGCCGTCATCGCCGCCGCCGA GCGGCTGGGCCTGAACGCTGCCCGCACGGCCGATATTCTGGGTGTGTCCGCGCCAACGGTCTCGCGCATGAGGCGGCTTG ATTTCCTCCTGGAGCCGGGCGCCAAGTCCTTCGAGCTTGCGGTGCTGCTGATCCGGGTTTTCCGCTCGCTGGATGCGATT ACCGGCGGCGATGAGGCGGTGGCGAAAAACTGGCTGCGCAATCACAATACGGCGCTTGATGCCGTGCCTGCCGAAAGGCT CACCACCATTACCGGATTGATCGATGTCCTCTCCTATCTGGACGCCCGACGCGCTCCTGTCTGA
Upstream 100 bases:
>100_bases CTTACGCGCCTGATTATAAATCTTGGGGCCGGGTTTATCCCGGCCTTCTTGTTTACAGAAAGAAATATGCTATATTCTTT CCAAGGAAAGGATATGTGCC
Downstream 100 bases:
>100_bases AAAACGCGCCGCATCGGGAAAATTTTGGCGGCTGGTGGAAGCGCAGCATCAGGTTTCCACCATGAAGCTGGTGGATACGG TGGAGGAGCAATCGCTGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MNIHAKTAMDPASQGRVVTKAVIAAAERLGLNAARTADILGVSAPTVSRMRRLDFLLEPGAKSFELAVLLIRVFRSLDAI TGGDEAVAKNWLRNHNTALDAVPAERLTTITGLIDVLSYLDARRAPV
Sequences:
>Translated_127_residues MNIHAKTAMDPASQGRVVTKAVIAAAERLGLNAARTADILGVSAPTVSRMRRLDFLLEPGAKSFELAVLLIRVFRSLDAI TGGDEAVAKNWLRNHNTALDAVPAERLTTITGLIDVLSYLDARRAPV >Mature_127_residues MNIHAKTAMDPASQGRVVTKAVIAAAERLGLNAARTADILGVSAPTVSRMRRLDFLLEPGAKSFELAVLLIRVFRSLDAI TGGDEAVAKNWLRNHNTALDAVPAERLTTITGLIDVLSYLDARRAPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13632; Mature: 13632
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIHAKTAMDPASQGRVVTKAVIAAAERLGLNAARTADILGVSAPTVSRMRRLDFLLEPG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCC AKSFELAVLLIRVFRSLDAITGGDEAVAKNWLRNHNTALDAVPAERLTTITGLIDVLSYL CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHH DARRAPV HHCCCCC >Mature Secondary Structure MNIHAKTAMDPASQGRVVTKAVIAAAERLGLNAARTADILGVSAPTVSRMRRLDFLLEPG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCC AKSFELAVLLIRVFRSLDAITGGDEAVAKNWLRNHNTALDAVPAERLTTITGLIDVLSYL CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHH DARRAPV HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA