Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 15888137
Identifier: 15888137
GI number: 15888137
Start: 792052
End: 792285
Strand: Reverse
Name: 15888137
Synonym: Atu0795
Alternate gene names: NA
Gene position: 792285-792052 (Counterclockwise)
Preceding gene: 159184468
Following gene: 159185429
Centisome position: 27.88
GC content: 52.56
Gene sequence:
>234_bases ATGCCGCTCTGCATCTCCTATGAAGACAGCGTGCAGAATTTGGCAAGGTTTTTCAAAACGGATGGGGAAAAGAAATTGGC GCAGGCGGAAATGGCGGTCTCCGGCCTGCGCCAGTCCTGCCGCAAGCGGCATCGGACGCAATGTTTTTGTGAGCTTTCCG AACCGGATTTTCACAACCACTGCTCTGATTTGAGACAGTACTGCGCGTCTCTTGCGCGAAACTTGTCTAGCTAA
Upstream 100 bases:
>100_bases GCGCAATTTCCTGACGAGGATACTTGCCCCTGCTGCCACTTTTCACTGATCTTATAACCGTTAAGCCGAAGCGAACAAGG CCTCCTGCGAGCGATCGCCA
Downstream 100 bases:
>100_bases AGTTTTATATTCGAAAATACCAACGCCCGACACCAGGGTGCCGGGCGTTGGTCGTTTCTCTATCCGGGACTGAAGGTACT AAACCGGACAGAGACGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MPLCISYEDSVQNLARFFKTDGEKKLAQAEMAVSGLRQSCRKRHRTQCFCELSEPDFHNHCSDLRQYCASLARNLSS
Sequences:
>Translated_77_residues MPLCISYEDSVQNLARFFKTDGEKKLAQAEMAVSGLRQSCRKRHRTQCFCELSEPDFHNHCSDLRQYCASLARNLSS >Mature_76_residues PLCISYEDSVQNLARFFKTDGEKKLAQAEMAVSGLRQSCRKRHRTQCFCELSEPDFHNHCSDLRQYCASLARNLSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8858; Mature: 8727
Theoretical pI: Translated: 8.13; Mature: 8.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 7.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLCISYEDSVQNLARFFKTDGEKKLAQAEMAVSGLRQSCRKRHRTQCFCELSEPDFHNH CCEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH CSDLRQYCASLARNLSS HHHHHHHHHHHHHHCCC >Mature Secondary Structure PLCISYEDSVQNLARFFKTDGEKKLAQAEMAVSGLRQSCRKRHRTQCFCELSEPDFHNH CEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH CSDLRQYCASLARNLSS HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA