Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159185429
Identifier: 159185429
GI number: 159185429
Start: 789418
End: 790518
Strand: Reverse
Name: 159185429
Synonym: Atu8136
Alternate gene names: NA
Gene position: 790518-789418 (Counterclockwise)
Preceding gene: 15888137
Following gene: 15888132
Centisome position: 27.82
GC content: 61.22
Gene sequence:
>1101_bases ATGGGGTCCGTGATGAAAATGGCTTGTTTTTCCATGAATGTCGTCTGTGCCGCTTTTTTCGCAACGGCGCTACCGGCGCT GTCGCAGGAACCGGCTCCGACCCCGCAGTATAACGTCGTTACCGACGCGGTGCTGTTCGACGGCGGCCCCTCGCTTGGCA ACAGCGACAAGGTGCGTTGGGATTTTTACAAGGCCGACCGAACCGGCGCACGCACCGAGACCAATGCCGGCGGTTCCTAT GACGCCACCTTCGAAGCAAAATTGCCGGCCGGCAGATATGTCGGCGTGGCGGCGCTCGGCAATGTGACCCGCGACGTGCC CTTCGAGGTGAAGGACGGAAGCATCGCGCGGCCGAAGGTGAATTTCGACGCGGCGGAACTGACTGTGGTGCCGAAGCGTA GCGCCGGCGGCGAGGTAGAAACCCAGGCGAAAACCGAAATCACCAAGGGCGATTTCAAGGACAGCGTCTATGGGCAGAAT ACGGTCTTCGTGCCGGCTGGCGAGATTGTCCTCACCGGCAGCATAGGGCCGGCGCGGGCGCAGGAAACGCTTGCCATCAA GGCCGGCGAAAAGATCAGCCACGAGTTGGTCATTCCGAGCGGCGTTGTCGTCGCCAAGGCGGTTTATGCGCAAGGCGGCA AGGCTGTCGAGACGGACGACATCCGTTTCGAGGCGATGTCGGCCAAGGAAACACTGGATGGCACGCGCCAGACCATCAGC GGCGTTTACGGCACCGGCAAGATGATGGAAATGCCCGCAGGCGATTTCGTGATGCGCGCCCGTCTCGGCAAGGTGACGGC GGAACAGCCATTCACGGTAACCGCCGGACAACGCTCGGAAATTACCCTCAATCTCGATGCCGGCGTTCTTGCCATCACCG CCCCCGGCGCGGAACGGATCGATATTGTTGAAACGACCAAGGACCTTCAGGGCACGCAGAAGGAGATTTCCGGCCGTTAC GGCACGAAACATCAGGAAACCCTGCATCCCGGCGATTATTCGGTGAAGGTAAGCTACGACAAGAAGTCCGGCCGCGACCC GAAGGAGATCACGGCGACCGTCAAGGCGGCGGAGCGGACCGAGACGACTGTGGCGGAGTAA
Upstream 100 bases:
>100_bases GGGAACCTGAAGTGCGGCAAAAACGTTGTGCACAACGGGTTCTCCTGTTCCGCGAATTGCGAGCTGCGGGAGCAACGATT CTGGCAGGGGGTAATCCGCA
Downstream 100 bases:
>100_bases TTGCCACGGGGCGGTTGTTCCCCGCATCCTCATTCCTCCTGCCCCTCCCTCATTCCTGTGCTTGTCACAGGAATCTAGCC AGCCCAAGTCCTTGGGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MGSVMKMACFSMNVVCAAFFATALPALSQEPAPTPQYNVVTDAVLFDGGPSLGNSDKVRWDFYKADRTGARTETNAGGSY DATFEAKLPAGRYVGVAALGNVTRDVPFEVKDGSIARPKVNFDAAELTVVPKRSAGGEVETQAKTEITKGDFKDSVYGQN TVFVPAGEIVLTGSIGPARAQETLAIKAGEKISHELVIPSGVVVAKAVYAQGGKAVETDDIRFEAMSAKETLDGTRQTIS GVYGTGKMMEMPAGDFVMRARLGKVTAEQPFTVTAGQRSEITLNLDAGVLAITAPGAERIDIVETTKDLQGTQKEISGRY GTKHQETLHPGDYSVKVSYDKKSGRDPKEITATVKAAERTETTVAE
Sequences:
>Translated_366_residues MGSVMKMACFSMNVVCAAFFATALPALSQEPAPTPQYNVVTDAVLFDGGPSLGNSDKVRWDFYKADRTGARTETNAGGSY DATFEAKLPAGRYVGVAALGNVTRDVPFEVKDGSIARPKVNFDAAELTVVPKRSAGGEVETQAKTEITKGDFKDSVYGQN TVFVPAGEIVLTGSIGPARAQETLAIKAGEKISHELVIPSGVVVAKAVYAQGGKAVETDDIRFEAMSAKETLDGTRQTIS GVYGTGKMMEMPAGDFVMRARLGKVTAEQPFTVTAGQRSEITLNLDAGVLAITAPGAERIDIVETTKDLQGTQKEISGRY GTKHQETLHPGDYSVKVSYDKKSGRDPKEITATVKAAERTETTVAE >Mature_365_residues GSVMKMACFSMNVVCAAFFATALPALSQEPAPTPQYNVVTDAVLFDGGPSLGNSDKVRWDFYKADRTGARTETNAGGSYD ATFEAKLPAGRYVGVAALGNVTRDVPFEVKDGSIARPKVNFDAAELTVVPKRSAGGEVETQAKTEITKGDFKDSVYGQNT VFVPAGEIVLTGSIGPARAQETLAIKAGEKISHELVIPSGVVVAKAVYAQGGKAVETDDIRFEAMSAKETLDGTRQTISG VYGTGKMMEMPAGDFVMRARLGKVTAEQPFTVTAGQRSEITLNLDAGVLAITAPGAERIDIVETTKDLQGTQKEISGRYG TKHQETLHPGDYSVKVSYDKKSGRDPKEITATVKAAERTETTVAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38847; Mature: 38716
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSVMKMACFSMNVVCAAFFATALPALSQEPAPTPQYNVVTDAVLFDGGPSLGNSDKVRW CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEE DFYKADRTGARTETNAGGSYDATFEAKLPAGRYVGVAALGNVTRDVPFEVKDGSIARPKV EEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCEECCCC NFDAAELTVVPKRSAGGEVETQAKTEITKGDFKDSVYGQNTVFVPAGEIVLTGSIGPARA CCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCC QETLAIKAGEKISHELVIPSGVVVAKAVYAQGGKAVETDDIRFEAMSAKETLDGTRQTIS CEEEEEECCCCCCCEEECCCCHHHHHHHHHCCCCEEECCCEEEEEECCHHHHCHHHHHHH GVYGTGKMMEMPAGDFVMRARLGKVTAEQPFTVTAGQRSEITLNLDAGVLAITAPGAERI HHCCCCEEEECCCCCEEHHHHHCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCCCEE DIVETTKDLQGTQKEISGRYGTKHQETLHPGDYSVKVSYDKKSGRDPKEITATVKAAERT EEEECCHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHEEEHHHHHHC ETTVAE HHCCCC >Mature Secondary Structure GSVMKMACFSMNVVCAAFFATALPALSQEPAPTPQYNVVTDAVLFDGGPSLGNSDKVRW CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCCCEEE DFYKADRTGARTETNAGGSYDATFEAKLPAGRYVGVAALGNVTRDVPFEVKDGSIARPKV EEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCEEECCCCEECCCC NFDAAELTVVPKRSAGGEVETQAKTEITKGDFKDSVYGQNTVFVPAGEIVLTGSIGPARA CCCCEEEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCC QETLAIKAGEKISHELVIPSGVVVAKAVYAQGGKAVETDDIRFEAMSAKETLDGTRQTIS CEEEEEECCCCCCCEEECCCCHHHHHHHHHCCCCEEECCCEEEEEECCHHHHCHHHHHHH GVYGTGKMMEMPAGDFVMRARLGKVTAEQPFTVTAGQRSEITLNLDAGVLAITAPGAERI HHCCCCEEEECCCCCEEHHHHHCCCCCCCCEEEECCCCCEEEEEECCCEEEEECCCCCEE DIVETTKDLQGTQKEISGRYGTKHQETLHPGDYSVKVSYDKKSGRDPKEITATVKAAERT EEEECCHHHCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHEEEHHHHHHC ETTVAE HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA