Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is ialB
Identifier: 15888109
GI number: 15888109
Start: 761679
End: 762203
Strand: Reverse
Name: ialB
Synonym: Atu0766
Alternate gene names: NA
Gene position: 762203-761679 (Counterclockwise)
Preceding gene: 159184461
Following gene: 159184456
Centisome position: 26.82
GC content: 62.67
Gene sequence:
>525_bases ATGCGTCTTTCCCCGCTCGCGCGCACTTTTCTTGCCGCCGCCGGTCTTGCCATCATCGCCCCCGCTGCCGCGGCGCTGGC GCAACAGCAGCCGCCCGGCACGCCGAAGTCGACGCATGGCGCATGGTCGGTCATCTGCGACAAGCCGGCAGGCGCATCCG AAGAACAATGCGCGCTGATGCAAAACGTGATTGCCGACGACCGCCCGGAAGTCGGCCTTTCGGTTGTCATCCTGAAAACC GCCGACCGCAAGTCGCGTATCCTGCGCATCCTCGCACCGCTCGGCGTGCTTCTGAAGGACGGCATGGAGCTTTACATCGA CAACAACAATATCGGCCGGGCCTATTTCACCCGCTGTTTCTCCGAAGGCTGCTATGTGGAAGTCGATATTGATGACGAGC TGCTGAAGGTGCTGCGTGCCGGCAAGAACGCCGTCTTCGCGCTGCGCGAATCCGTCGATCAGGACCGGGTGGGCATTCCG ATCGAGCTTTCCGGCTTTGCCGAGGGCTACGACGCGCTTCCCTGA
Upstream 100 bases:
>100_bases CCTATTTCCGCCCAACTCCGCTGGAATTGAAAGCACTAGGCTTTTTTTTCCGGATTATGGCGTCAAAATAGCCGCACTGA TTCGAATCCCAGAGGTATCC
Downstream 100 bases:
>100_bases GGCATCGTCGTAACGGGCAGCCTTGCGTCTGCCCGTTCCAGTGCCTAAATCGGTCATGAACGATCATGACTGGAGCCTGA GATGACCGACGACCTTGTAA
Product: invasion associated locus B
Products: NA
Alternate protein names: Invasion Associated Locus B; Invasion Associated Locus B Protein; Invasion Protein B
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MRLSPLARTFLAAAGLAIIAPAAAALAQQQPPGTPKSTHGAWSVICDKPAGASEEQCALMQNVIADDRPEVGLSVVILKT ADRKSRILRILAPLGVLLKDGMELYIDNNNIGRAYFTRCFSEGCYVEVDIDDELLKVLRAGKNAVFALRESVDQDRVGIP IELSGFAEGYDALP
Sequences:
>Translated_174_residues MRLSPLARTFLAAAGLAIIAPAAAALAQQQPPGTPKSTHGAWSVICDKPAGASEEQCALMQNVIADDRPEVGLSVVILKT ADRKSRILRILAPLGVLLKDGMELYIDNNNIGRAYFTRCFSEGCYVEVDIDDELLKVLRAGKNAVFALRESVDQDRVGIP IELSGFAEGYDALP >Mature_174_residues MRLSPLARTFLAAAGLAIIAPAAAALAQQQPPGTPKSTHGAWSVICDKPAGASEEQCALMQNVIADDRPEVGLSVVILKT ADRKSRILRILAPLGVLLKDGMELYIDNNNIGRAYFTRCFSEGCYVEVDIDDELLKVLRAGKNAVFALRESVDQDRVGIP IELSGFAEGYDALP
Specific function: Unknown
COG id: COG5342
COG function: function code R; Invasion protein B, involved in pathogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18682; Mature: 18682
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLSPLARTFLAAAGLAIIAPAAAALAQQQPPGTPKSTHGAWSVICDKPAGASEEQCALM CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH QNVIADDRPEVGLSVVILKTADRKSRILRILAPLGVLLKDGMELYIDNNNIGRAYFTRCF HHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHH SEGCYVEVDIDDELLKVLRAGKNAVFALRESVDQDRVGIPIELSGFAEGYDALP CCCCEEEEECCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCC >Mature Secondary Structure MRLSPLARTFLAAAGLAIIAPAAAALAQQQPPGTPKSTHGAWSVICDKPAGASEEQCALM CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHH QNVIADDRPEVGLSVVILKTADRKSRILRILAPLGVLLKDGMELYIDNNNIGRAYFTRCF HHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHH SEGCYVEVDIDDELLKVLRAGKNAVFALRESVDQDRVGIPIELSGFAEGYDALP CCCCEEEEECCHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA