Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888040
Identifier: 15888040
GI number: 15888040
Start: 694767
End: 695504
Strand: Direct
Name: 15888040
Synonym: Atu0696
Alternate gene names: NA
Gene position: 694767-695504 (Clockwise)
Preceding gene: 15888039
Following gene: 15888041
Centisome position: 24.45
GC content: 61.79
Gene sequence:
>738_bases ATGGTAGCGGATATCGAACTTGATGCGGCACAGTCGATCGCCGCTGTGCTCTTCGACAAGGACGGCACGCTGTTAGGTTA CGACGCGAGCTGGGGACCGGTAAACCGCGAACTCGCGTCGATTGCCGCCAAGGGTGACGCAGCACTCGCCGACCGGCTTC TCGCAGCCTGCGGCATGGACCCCGTCACCGGCCATGTGGTGCCGGACAGCCTGCTCGCCGCCGGCAACACGGCGGAAATC GCCGCCGGCCTGGTCGCCGCCGGTTCATCCTGCGATGTTGTCGAACTGACGCAACGCCTCGACCGGCTGTTCACCGAGGC CGCGGATAAATCCGTGCCGGTCACTGATCTCAAGGCCTTTTTCGCAAGGCTCAAGGCGCGCGGCTACAAGCTCGGCATCG CCTCCAGCGACAATGAAAATTCCATCCGCCAGACGGCCATCCGCTTCGGTTTCGAAGAAGATATCGATTTTGTAGCGGGT TATGACAGCGGTTACGGCACCAAACCGCAGCCCGGCATGGTTCTCGGTTTCTGCGAGGCGATCGGTTTCCCGCCGGAACG CGTGGCTGTTGTCGGGGATAATAATCACGATCTGCACATGGCCAAAAATGCCGGCGCCGGTCTGCGGATCGCCGTTCTGA CGGGGACCGGCTCGCGCGAAAGCCTTGGTGCGGATGCGCATTATTGTTTCGACGACATCACCGGACTTGAGGCCCTTTTG CCGGAACGGGCGGTCTAA
Upstream 100 bases:
>100_bases ATATGCGCGGCGCGCTCTCCTCCACCGTCAAGGCGCTGGAGCCCTATATCAACCCGCTCACCGTTTCGGCCAAGCTGCAA CCGCGGAGCGCCATCGGTTC
Downstream 100 bases:
>100_bases GAAGAGCTCAGCTTCCGTCATTCCGGGCTTGTGCCGGAATCCAGCCCGCCCAAGTCCTTTGCTGAAAAAAGAGTCCTTCC CGCCGCAAGACGTGGAAAGC
Product: phosphatase
Products: glycolate; phosphate
Alternate protein names: Phosphoglycolate Phosphatase; Phosphatase; Haloacid Dehalogenase-Like Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase/Epoxide Hydrolase Family Protein; Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase Domain Protein Hydrolase; HAD-Like Hydrolase; Phosphoglycolate Phosphatase Protein
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MVADIELDAAQSIAAVLFDKDGTLLGYDASWGPVNRELASIAAKGDAALADRLLAACGMDPVTGHVVPDSLLAAGNTAEI AAGLVAAGSSCDVVELTQRLDRLFTEAADKSVPVTDLKAFFARLKARGYKLGIASSDNENSIRQTAIRFGFEEDIDFVAG YDSGYGTKPQPGMVLGFCEAIGFPPERVAVVGDNNHDLHMAKNAGAGLRIAVLTGTGSRESLGADAHYCFDDITGLEALL PERAV
Sequences:
>Translated_245_residues MVADIELDAAQSIAAVLFDKDGTLLGYDASWGPVNRELASIAAKGDAALADRLLAACGMDPVTGHVVPDSLLAAGNTAEI AAGLVAAGSSCDVVELTQRLDRLFTEAADKSVPVTDLKAFFARLKARGYKLGIASSDNENSIRQTAIRFGFEEDIDFVAG YDSGYGTKPQPGMVLGFCEAIGFPPERVAVVGDNNHDLHMAKNAGAGLRIAVLTGTGSRESLGADAHYCFDDITGLEALL PERAV >Mature_245_residues MVADIELDAAQSIAAVLFDKDGTLLGYDASWGPVNRELASIAAKGDAALADRLLAACGMDPVTGHVVPDSLLAAGNTAEI AAGLVAAGSSCDVVELTQRLDRLFTEAADKSVPVTDLKAFFARLKARGYKLGIASSDNENSIRQTAIRFGFEEDIDFVAG YDSGYGTKPQPGMVLGFCEAIGFPPERVAVVGDNNHDLHMAKNAGAGLRIAVLTGTGSRESLGADAHYCFDDITGLEALL PERAV
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI71983424, Length=236, Percent_Identity=28.8135593220339, Blast_Score=88, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17567717, Length=167, Percent_Identity=28.1437125748503, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.3.18
Molecular weight: Translated: 25574; Mature: 25574
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVADIELDAAQSIAAVLFDKDGTLLGYDASWGPVNRELASIAAKGDAALADRLLAACGMD CCCCCCCCHHHHHEEEEECCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCC PVTGHVVPDSLLAAGNTAEIAAGLVAAGSSCDVVELTQRLDRLFTEAADKSVPVTDLKAF CCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH FARLKARGYKLGIASSDNENSIRQTAIRFGFEEDIDFVAGYDSGYGTKPQPGMVLGFCEA HHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEEEHHH IGFPPERVAVVGDNNHDLHMAKNAGAGLRIAVLTGTGSRESLGADAHYCFDDITGLEALL HCCCHHHEEEEECCCCCEEEECCCCCCEEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHC PERAV CCCCC >Mature Secondary Structure MVADIELDAAQSIAAVLFDKDGTLLGYDASWGPVNRELASIAAKGDAALADRLLAACGMD CCCCCCCCHHHHHEEEEECCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCC PVTGHVVPDSLLAAGNTAEIAAGLVAAGSSCDVVELTQRLDRLFTEAADKSVPVTDLKAF CCCCCCCCHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHH FARLKARGYKLGIASSDNENSIRQTAIRFGFEEDIDFVAGYDSGYGTKPQPGMVLGFCEA HHHHHHCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCEEEEHHH IGFPPERVAVVGDNNHDLHMAKNAGAGLRIAVLTGTGSRESLGADAHYCFDDITGLEALL HCCCHHHEEEEECCCCCEEEECCCCCCEEEEEEECCCCCHHCCCCHHHHHHHHHHHHHHC PERAV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-phosphoglycolate; H2O
Specific reaction: 2-phosphoglycolate + H2O = glycolate + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA