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The map label for this gene is fliF [H]

Identifier: 15887871

GI number: 15887871

Start: 512099

End: 513799

Strand: Direct

Name: fliF [H]

Synonym: Atu0523

Alternate gene names: 15887871

Gene position: 512099-513799 (Clockwise)

Preceding gene: 15887870

Following gene: 159184353

Centisome position: 18.02

GC content: 60.44

Gene sequence:

>1701_bases
ATGACGGTGCGGAACAGAATGAATCTGTTAAATCAAATCCCTCAGGTCTTGAAGAATGTCGCGGCGCTGGGCCAGACGCG
GCTGCTGATGCTGGGCGGCGTGGGCGTATTGTCCATGGCCATCATCCTGGCTGCAGCGCTTTATGTGAACCGTCCTGCTT
ACGAGACCCTCTATGTGGGTCTTGAAAAAAGTGACCTCAACAAGATCAGCATTGCACTCGCCGAATCGGGTCTGGACTTT
CAGGTCGGGACCGATGGTTCCAGCCTTCAGGTTCCGGTCGGGCTCACCAGCAAGGCACGGCTGCTTCTGGCTGAACGCGG
CCTACCCGACAGTGCCAATGCGGGTTATGAGCTTTTTGACAATGTCGGCTCCCTCGGCCTGACGTCCTTCATGCAGGAAG
TGACGCGCGTTCGTGCCCTTGAGGGCGAGATCGGCCGCTCCATCCAGCAGATCGATGGCGTTTCCGCTGCCCGCGTTCAT
ATCGTCCTGCCTGACGTCGGCAATTTCCGCCGTGGCGAACAGAAACCCACGGCATCGGTGATGATCCGCGCGAGCGCATC
CGCAGGCCGCAAGGCCTCCGCCTCCATTCGCCATCTCGTCGCCTCGGCCGTTCCCGGTCTCGAAGTCGATGACGTGACAC
TGCTCGATTCGACCGGCCAGCTTCTGGCCTCCGGCGATGATGTCACCAACGCCGCGATGAACCGGTCGCTGACGCTGGCC
CAAAATGTTCAGCAGGAAATTACGACCAATATCGACAAGGCGCTGGCGCCTTTCCTCGGCATAGACAATTTCCGCTCGAG
TGTGACGGCGCAGATCAATACTGACAGCCGCCAGGTCCAGGAGACCGTTTACGACCCGGAATCGCGCGTGGAACGCTCCG
TTCGCACGGTGAAGGAAGACCAGAAATCCCAGGAAACGCAGCCGGATACGGCCGCGACCGTGGAGCAGAACGTGCCGCAG
GCCGCGCCCCAGGGCGGCGGTGGTGGCCCGCAGTCTTCCGATCAGTCGGCAAAGAAGGAAGAGCAGACCAACTACGAGAT
CAATTCCAAGACGGTTGCCACGGTCAAGAACGGCTATACCCTCGAAAAGATTTCGGTTGCCGTGGTCGTCAACAAGGGCC
GTATTGCCAAGATGGTCGGCGAACCGGCCGATCAGGCCAAGATCGACGCCTATCTTGCGGAAATGCAGAAGATCGTCACC
TCGGCCGCAGGCATTTCTTCCGATCGTGGCGACATTGTCACCCTGACGGCGATGGACTTCCTCGAAACGCAGCTGCTTGA
CGAGGCTGCCAGTGGGCCGGGTGTCATGGAAGTGCTGAGCCGAAATTCCGCCGGCATCATCAACTCACTCGCCTTCGTCG
CCGTCGCCTTCCTCGTAGTCTGGCTCGGTGTACGCCCTCTGGTCCGCACGGTCACTGCCAACGGTTCGGCTGCGGCTCAG
CTCAGCCAGGAGTCCGCCGGTCTCGAATTGCCGGACTTCTCTCCGGGCATGGAGGCGGGTGCAGGTGGTCTCATGGAAGG
TTTCGGGGCGGATTTCGGTTTCGACAGCACCGACGATCTTCTGGCTGGCGGCGATGGCGAAGGCACATTCAACCGCCGGG
TTCGCGAAGGACCCGAACGCAGGCTCTCCCGCATGGTGGAAATCAGCGAGGAGAGAGCCGCCAAGATCCTGCGCAAATGG
GCGGTGGAAAAAGCAGCATAA

Upstream 100 bases:

>100_bases
CCGGCCGTTCCTTCCTTCGCTGAATGCGGAGGAAGGCAACGCTCGCGCAAGCTTCGCACCCTATTGTCACGACGGGGCCA
AAAGGTCTCGGACTCTATGA

Downstream 100 bases:

>100_bases
TGACAAAAAGGCCGGTTTTACCCGGCCTTTTTTCCGTTTCTGGGGTTTTTGCTATGCTTGGCGGGCACATCGTGGCAATC
TCGTTTCGGGACAGTGTTTA

Product: flagellar MS-ring protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MTVRNRMNLLNQIPQVLKNVAALGQTRLLMLGGVGVLSMAIILAAALYVNRPAYETLYVGLEKSDLNKISIALAESGLDF
QVGTDGSSLQVPVGLTSKARLLLAERGLPDSANAGYELFDNVGSLGLTSFMQEVTRVRALEGEIGRSIQQIDGVSAARVH
IVLPDVGNFRRGEQKPTASVMIRASASAGRKASASIRHLVASAVPGLEVDDVTLLDSTGQLLASGDDVTNAAMNRSLTLA
QNVQQEITTNIDKALAPFLGIDNFRSSVTAQINTDSRQVQETVYDPESRVERSVRTVKEDQKSQETQPDTAATVEQNVPQ
AAPQGGGGGPQSSDQSAKKEEQTNYEINSKTVATVKNGYTLEKISVAVVVNKGRIAKMVGEPADQAKIDAYLAEMQKIVT
SAAGISSDRGDIVTLTAMDFLETQLLDEAASGPGVMEVLSRNSAGIINSLAFVAVAFLVVWLGVRPLVRTVTANGSAAAQ
LSQESAGLELPDFSPGMEAGAGGLMEGFGADFGFDSTDDLLAGGDGEGTFNRRVREGPERRLSRMVEISEERAAKILRKW
AVEKAA

Sequences:

>Translated_566_residues
MTVRNRMNLLNQIPQVLKNVAALGQTRLLMLGGVGVLSMAIILAAALYVNRPAYETLYVGLEKSDLNKISIALAESGLDF
QVGTDGSSLQVPVGLTSKARLLLAERGLPDSANAGYELFDNVGSLGLTSFMQEVTRVRALEGEIGRSIQQIDGVSAARVH
IVLPDVGNFRRGEQKPTASVMIRASASAGRKASASIRHLVASAVPGLEVDDVTLLDSTGQLLASGDDVTNAAMNRSLTLA
QNVQQEITTNIDKALAPFLGIDNFRSSVTAQINTDSRQVQETVYDPESRVERSVRTVKEDQKSQETQPDTAATVEQNVPQ
AAPQGGGGGPQSSDQSAKKEEQTNYEINSKTVATVKNGYTLEKISVAVVVNKGRIAKMVGEPADQAKIDAYLAEMQKIVT
SAAGISSDRGDIVTLTAMDFLETQLLDEAASGPGVMEVLSRNSAGIINSLAFVAVAFLVVWLGVRPLVRTVTANGSAAAQ
LSQESAGLELPDFSPGMEAGAGGLMEGFGADFGFDSTDDLLAGGDGEGTFNRRVREGPERRLSRMVEISEERAAKILRKW
AVEKAA
>Mature_565_residues
TVRNRMNLLNQIPQVLKNVAALGQTRLLMLGGVGVLSMAIILAAALYVNRPAYETLYVGLEKSDLNKISIALAESGLDFQ
VGTDGSSLQVPVGLTSKARLLLAERGLPDSANAGYELFDNVGSLGLTSFMQEVTRVRALEGEIGRSIQQIDGVSAARVHI
VLPDVGNFRRGEQKPTASVMIRASASAGRKASASIRHLVASAVPGLEVDDVTLLDSTGQLLASGDDVTNAAMNRSLTLAQ
NVQQEITTNIDKALAPFLGIDNFRSSVTAQINTDSRQVQETVYDPESRVERSVRTVKEDQKSQETQPDTAATVEQNVPQA
APQGGGGGPQSSDQSAKKEEQTNYEINSKTVATVKNGYTLEKISVAVVVNKGRIAKMVGEPADQAKIDAYLAEMQKIVTS
AAGISSDRGDIVTLTAMDFLETQLLDEAASGPGVMEVLSRNSAGIINSLAFVAVAFLVVWLGVRPLVRTVTANGSAAAQL
SQESAGLELPDFSPGMEAGAGGLMEGFGADFGFDSTDDLLAGGDGEGTFNRRVREGPERRLSRMVEISEERAAKILRKWA
VEKAA

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

Organism=Escherichia coli, GI1788248, Length=416, Percent_Identity=29.5673076923077, Blast_Score=156, Evalue=3e-39,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 60006; Mature: 59874

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVRNRMNLLNQIPQVLKNVAALGQTRLLMLGGVGVLSMAIILAAALYVNRPAYETLYVG
CCCHHHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEE
LEKSDLNKISIALAESGLDFQVGTDGSSLQVPVGLTSKARLLLAERGLPDSANAGYELFD
CCCCCCCEEEEEEECCCCEEEECCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHH
NVGSLGLTSFMQEVTRVRALEGEIGRSIQQIDGVSAARVHIVLPDVGNFRRGEQKPTASV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEE
MIRASASAGRKASASIRHLVASAVPGLEVDDVTLLDSTGQLLASGDDVTNAAMNRSLTLA
EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEECCCHHHHHHHCCCHHHH
QNVQQEITTNIDKALAPFLGIDNFRSSVTAQINTDSRQVQETVYDPESRVERSVRTVKED
HHHHHHHHHHHHHHHHHHHCHHHHHCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHH
QKSQETQPDTAATVEQNVPQAAPQGGGGGPQSSDQSAKKEEQTNYEINSKTVATVKNGYT
HHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEECCCEEEEECCCEE
LEKISVAVVVNKGRIAKMVGEPADQAKIDAYLAEMQKIVTSAAGISSDRGDIVTLTAMDF
EEEEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHH
LETQLLDEAASGPGVMEVLSRNSAGIINSLAFVAVAFLVVWLGVRPLVRTVTANGSAAAQ
HHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LSQESAGLELPDFSPGMEAGAGGLMEGFGADFGFDSTDDLLAGGDGEGTFNRRVREGPER
HHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHCCHHH
RLSRMVEISEERAAKILRKWAVEKAA
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TVRNRMNLLNQIPQVLKNVAALGQTRLLMLGGVGVLSMAIILAAALYVNRPAYETLYVG
CCHHHHHHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEE
LEKSDLNKISIALAESGLDFQVGTDGSSLQVPVGLTSKARLLLAERGLPDSANAGYELFD
CCCCCCCEEEEEEECCCCEEEECCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCHHHHH
NVGSLGLTSFMQEVTRVRALEGEIGRSIQQIDGVSAARVHIVLPDVGNFRRGEQKPTASV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCEEE
MIRASASAGRKASASIRHLVASAVPGLEVDDVTLLDSTGQLLASGDDVTNAAMNRSLTLA
EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEECCCHHHHHHHCCCHHHH
QNVQQEITTNIDKALAPFLGIDNFRSSVTAQINTDSRQVQETVYDPESRVERSVRTVKED
HHHHHHHHHHHHHHHHHHHCHHHHHCCEEEEECCCHHHHHHHHCCCHHHHHHHHHHHHHH
QKSQETQPDTAATVEQNVPQAAPQGGGGGPQSSDQSAKKEEQTNYEINSKTVATVKNGYT
HHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCEECCCEEEEECCCEE
LEKISVAVVVNKGRIAKMVGEPADQAKIDAYLAEMQKIVTSAAGISSDRGDIVTLTAMDF
EEEEEEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHH
LETQLLDEAASGPGVMEVLSRNSAGIINSLAFVAVAFLVVWLGVRPLVRTVTANGSAAAQ
HHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LSQESAGLELPDFSPGMEAGAGGLMEGFGADFGFDSTDDLLAGGDGEGTFNRRVREGPER
HHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHCCHHH
RLSRMVEISEERAAKILRKWAVEKAA
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9858749; 11481430 [H]