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The map label for this gene is luxR [H]

Identifier: 159184353

GI number: 159184353

Start: 514221

End: 514901

Strand: Direct

Name: luxR [H]

Synonym: Atu0524

Alternate gene names: 159184353

Gene position: 514221-514901 (Clockwise)

Preceding gene: 15887871

Following gene: 15887874

Centisome position: 18.1

GC content: 55.65

Gene sequence:

>681_bases
ATGGGTAAGCCCTTGCCGCGCGATCAGCTTGCTAAAAACGTCGCAGCCACGGCTGCTGCCGGTAACGTTGCAGGCGCACT
GGATCTGCTCGTAACCTATGCTGGCGCCTCGCATTATTTGCTGGCGCGAGATGATCTTCTCGAAGAAACCGGGCTGAAAT
TCATCGTCACATCCGACTGGCCTTTCGATCTGGTCCGCAGGCTCGGCATTGAACTCACCAACAGCCAGAACCGGTCGAGC
GAAATGGAGAAGTGCCTTTCGCTGCTTCAGCCGCGATTGCTTCTCCTTCCCGACGATGTTTCCGTGCCCTATGGCATAGA
CAGGCAATATTCGGCACTCTCCTTTTGTGTGGGCCGCATCCGCCTTTCCCTTTTGCTGCTGTTTCCGGAAGAAGCGGTTC
CGTCACCGGAGCGCCTGCGGGAAATCGCCCTGCTGACGGGGTATTGCGTCAGCTTCGGCATCGCCAGCGAAGCAAAGACC
GTGCGCGATATCGATCTCACCGAGCGTGAGCTCGAGTGCCTGTTCTGGATCGCGGAAGGCAAGACAAGTGATGAAATTGC
GATGATCCTTGGCATTTCACGCAATACGATCAATAATTACATCACAAGCGTGATGCGTAAAACCGCGACAAAAACCCGCT
CGGAGGCAATTGCCTACGCCGTGCGCAACAACCTCGTATAA

Upstream 100 bases:

>100_bases
TTCCATCCCGAGGTATAATCTCCCGCTGGGAGCAAGAGGGCGTAGGCGATTGAAAGTCGATGTTGATATCCGCAGGCTGT
CTGCCAAGCCTCTGGAGGGC

Downstream 100 bases:

>100_bases
TGGTCGGACGGATGGTACAGACGAAAGACAATGAGGGTACAGGTCGAATGGGCATGTTTTACCGCAGCCCTGTCGTGACG
AGCCGGTCGGATTTGTTTCC

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MGKPLPRDQLAKNVAATAAAGNVAGALDLLVTYAGASHYLLARDDLLEETGLKFIVTSDWPFDLVRRLGIELTNSQNRSS
EMEKCLSLLQPRLLLLPDDVSVPYGIDRQYSALSFCVGRIRLSLLLLFPEEAVPSPERLREIALLTGYCVSFGIASEAKT
VRDIDLTERELECLFWIAEGKTSDEIAMILGISRNTINNYITSVMRKTATKTRSEAIAYAVRNNLV

Sequences:

>Translated_226_residues
MGKPLPRDQLAKNVAATAAAGNVAGALDLLVTYAGASHYLLARDDLLEETGLKFIVTSDWPFDLVRRLGIELTNSQNRSS
EMEKCLSLLQPRLLLLPDDVSVPYGIDRQYSALSFCVGRIRLSLLLLFPEEAVPSPERLREIALLTGYCVSFGIASEAKT
VRDIDLTERELECLFWIAEGKTSDEIAMILGISRNTINNYITSVMRKTATKTRSEAIAYAVRNNLV
>Mature_225_residues
GKPLPRDQLAKNVAATAAAGNVAGALDLLVTYAGASHYLLARDDLLEETGLKFIVTSDWPFDLVRRLGIELTNSQNRSSE
MEKCLSLLQPRLLLLPDDVSVPYGIDRQYSALSFCVGRIRLSLLLLFPEEAVPSPERLREIALLTGYCVSFGIASEAKTV
RDIDLTERELECLFWIAEGKTSDEIAMILGISRNTINNYITSVMRKTATKTRSEAIAYAVRNNLV

Specific function: Functions as a BHL-responsive transcriptional regulator [H]

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH luxR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016032
- InterPro:   IPR005143
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03472 Autoind_bind; PF00196 GerE [H]

EC number: NA

Molecular weight: Translated: 24995; Mature: 24864

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKPLPRDQLAKNVAATAAAGNVAGALDLLVTYAGASHYLLARDDLLEETGLKFIVTSDW
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCEEEEECCC
PFDLVRRLGIELTNSQNRSSEMEKCLSLLQPRLLLLPDDVSVPYGIDRQYSALSFCVGRI
CHHHHHHHCCEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
RLSLLLLFPEEAVPSPERLREIALLTGYCVSFGIASEAKTVRDIDLTERELECLFWIAEG
HHHHHEEECHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHEEEEEEEECC
KTSDEIAMILGISRNTINNYITSVMRKTATKTRSEAIAYAVRNNLV
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKPLPRDQLAKNVAATAAAGNVAGALDLLVTYAGASHYLLARDDLLEETGLKFIVTSDW
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCEEEEECCC
PFDLVRRLGIELTNSQNRSSEMEKCLSLLQPRLLLLPDDVSVPYGIDRQYSALSFCVGRI
CHHHHHHHCCEECCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHHHH
RLSLLLLFPEEAVPSPERLREIALLTGYCVSFGIASEAKTVRDIDLTERELECLFWIAEG
HHHHHEEECHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHEEEEEEEECC
KTSDEIAMILGISRNTINNYITSVMRKTATKTRSEAIAYAVRNNLV
CCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9286976 [H]