Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887870
Identifier: 15887870
GI number: 15887870
Start: 511607
End: 511990
Strand: Direct
Name: 15887870
Synonym: Atu0522
Alternate gene names: NA
Gene position: 511607-511990 (Clockwise)
Preceding gene: 15887869
Following gene: 15887871
Centisome position: 18.0
GC content: 60.42
Gene sequence:
>384_bases ATGCAGCTTGCAGAGCACACCGCCACCACTCCGTTCGAAGAAGCCCTGCCGGATGTACTGATGCGGGTGGTATCGGAACT GCACGACGTCGCCTATCTCATCGAGCGCATCGAGCCGCAATTGCTTGATGTGACCAGCGGTCAATTGTCCGCCGAAGGCG TCAAGCTGTTGCAGGGCATCGACCTTGCCGTCCAGAAAACCCGTGGCCTTGCCGAATTCATCGATACCATCACCGGCTCC ATCCCCGCAGACTGGTTCGTGGATGTCTCCACCGCACTCAGCCTCGTCAAGCTTGCCGAAATGCAAAAGGCGCTCGGCGC GGCCTTCCGCCACGGCCATTCCCAGCCGCTCGACAAGGCTTCCGGCGACTTCGACCTCTTCTAG
Upstream 100 bases:
>100_bases GTGCGGAAACCCAGAAGACGGTTGCCATGGAAACACGTCCGGTGCCGGCACCCAAACCCGTCGCCAACGACATCGAATTT TTCTAGTCACGGAGTTTCCA
Downstream 100 bases:
>100_bases AACATATTCCGGCCGTTCCTTCCTTCGCTGAATGCGGAGGAAGGCAACGCTCGCGCAAGCTTCGCACCCTATTGTCACGA CGGGGCCAAAAGGTCTCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MQLAEHTATTPFEEALPDVLMRVVSELHDVAYLIERIEPQLLDVTSGQLSAEGVKLLQGIDLAVQKTRGLAEFIDTITGS IPADWFVDVSTALSLVKLAEMQKALGAAFRHGHSQPLDKASGDFDLF
Sequences:
>Translated_127_residues MQLAEHTATTPFEEALPDVLMRVVSELHDVAYLIERIEPQLLDVTSGQLSAEGVKLLQGIDLAVQKTRGLAEFIDTITGS IPADWFVDVSTALSLVKLAEMQKALGAAFRHGHSQPLDKASGDFDLF >Mature_127_residues MQLAEHTATTPFEEALPDVLMRVVSELHDVAYLIERIEPQLLDVTSGQLSAEGVKLLQGIDLAVQKTRGLAEFIDTITGS IPADWFVDVSTALSLVKLAEMQKALGAAFRHGHSQPLDKASGDFDLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13818; Mature: 13818
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLAEHTATTPFEEALPDVLMRVVSELHDVAYLIERIEPQLLDVTSGQLSAEGVKLLQGI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHH DLAVQKTRGLAEFIDTITGSIPADWFVDVSTALSLVKLAEMQKALGAAFRHGHSQPLDKA HHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SGDFDLF CCCCCCC >Mature Secondary Structure MQLAEHTATTPFEEALPDVLMRVVSELHDVAYLIERIEPQLLDVTSGQLSAEGVKLLQGI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHH DLAVQKTRGLAEFIDTITGSIPADWFVDVSTALSLVKLAEMQKALGAAFRHGHSQPLDKA HHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SGDFDLF CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA