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The map label for this gene is sun [H]

Identifier: 15887638

GI number: 15887638

Start: 283635

End: 284924

Strand: Reverse

Name: sun [H]

Synonym: Atu0289

Alternate gene names: 15887638

Gene position: 284924-283635 (Counterclockwise)

Preceding gene: 15887639

Following gene: 159184243

Centisome position: 10.03

GC content: 61.09

Gene sequence:

>1290_bases
ATGCGTTTGGGCGGGCGTTTGGCCGGAGCAATCGAAGTATTGGCGGATATTGAGGGACGCAGGCGTCCCGTCGCCGATGC
GCTGAAGGATTGGGGTCTCGCCCATCGTTTTGCCGGCTCCGGCGACAGGGCCGCCATCGGCAACATCGTTTATGACGCGC
TTCGTATGAAACTGTCGCACGCCTGGCTGATGGATGACGATAGCGCCGCCTCGCTTGCCTATGCTGTTCTGCTGCGGCAA
TGGGGCAAAAGCTTTGCGGAACTGACGGCGGAATTCGACGGCGATAAATTCGCCCCCGCCGCGCCCGACGCGGAAAGGCA
GCAGGCCTTTCTTTCCCGTTCACTTTCCGACGCGCCGGCCTATATTCAGGGCGATGTTCCCGAATGGGTTCAATCTTCCC
TCGAAACTGCCTTCGGGGAGCGTTGGCTCGCCGAGGCGCAGGCGCTCAACGAGCGACCGACCCTAGACCTGCGCGCCAAC
ACGCTGAAGGCAACCCGGGACAAGGTTCTGAAGGCGCTTGAGGAAAGCGGCGCGGAAGCCACTCGGATTGCCCGGCAGGG
TCTGCGTATACCCGCCGGTGAAGGCCCTTCCCGCCTGCCGAATGTCACCGCCGAACTTTCCTTCCAGAAGGGTTGGTTCG
AGGTGCAGGATGAAGGCTCACAGATCGTCGCCGATCTTGCCGGTGCCCGGGAAGGTGAACAGGTCCTCGATTATTGCGCC
GGTGGTGGCGGCAAGACGTTGGCCATGGCCGCCAGCATGAACAATAAAGGTCAGGTCCACGCTTTCGATGCCGATCGCAA
GCGGCTCGCGCCGATCATCGAGCGGCTGAAGCGGGCCGGTACGCGCAATGTGCAGGTGCATGATCGCGCAGCGGGTCTTG
CGCCGTTCCAGGAAAAATTCGACCGCGTTCTGGTCGATGCACCCTGCACCGGCACCGGAACCTGGCGCCGCCGCCCCGAC
ACCAAATGGCGGCTGACGGCGCGCAATCTGGAAGAACGCGTGCAGCAGCAGGGCGAGGCGCTTTCGCAAGCCAAGGGTTT
CGTGCGCCCGGGCGGCGAGCTACTTTATGTTACCTGTTCGGTTCTGCCCGAGGAAAATGAGCAGCAGGTCAGGCGCTTCT
GCGAGGAAAATCCAGAATTTGCCATCGGTTCGGCTCTGGAGCGCTGGCAGTCGATTTTCAGTGGCAATGCGAATAAACCG
CATTCTTCAGATGGCAAGACGGTGACGCTCACGCCTGCAACCACAGATACGGACGGTTTCTTCTTCTGCTTGATGAAACG
CAAAGCATAA

Upstream 100 bases:

>100_bases
ACTGCCAAGGTCTGCTACGAGATCGTCAAGGCCGATTGAGCCTTGCCCTCGCCGCCATTCGCGTCTACCAACCGGGCTTA
TCAGCAAGAAGAGGTAGACA

Downstream 100 bases:

>100_bases
AGCAGGTTTTGCACGCAGCGATTTTACTTGGGAAATACCGCGCGGGCTTGTTTCAAAGCATTCTAAACTAGAATGTTTGA
CACAAGTTTGTGATTGGGTC

Product: Sun protein

Products: NA

Alternate protein names: 16S rRNA m5C967 methyltransferase; rRNA (cytosine-C(5)-)-methyltransferase rsmB [H]

Number of amino acids: Translated: 429; Mature: 429

Protein sequence:

>429_residues
MRLGGRLAGAIEVLADIEGRRRPVADALKDWGLAHRFAGSGDRAAIGNIVYDALRMKLSHAWLMDDDSAASLAYAVLLRQ
WGKSFAELTAEFDGDKFAPAAPDAERQQAFLSRSLSDAPAYIQGDVPEWVQSSLETAFGERWLAEAQALNERPTLDLRAN
TLKATRDKVLKALEESGAEATRIARQGLRIPAGEGPSRLPNVTAELSFQKGWFEVQDEGSQIVADLAGAREGEQVLDYCA
GGGGKTLAMAASMNNKGQVHAFDADRKRLAPIIERLKRAGTRNVQVHDRAAGLAPFQEKFDRVLVDAPCTGTGTWRRRPD
TKWRLTARNLEERVQQQGEALSQAKGFVRPGGELLYVTCSVLPEENEQQVRRFCEENPEFAIGSALERWQSIFSGNANKP
HSSDGKTVTLTPATTDTDGFFFCLMKRKA

Sequences:

>Translated_429_residues
MRLGGRLAGAIEVLADIEGRRRPVADALKDWGLAHRFAGSGDRAAIGNIVYDALRMKLSHAWLMDDDSAASLAYAVLLRQ
WGKSFAELTAEFDGDKFAPAAPDAERQQAFLSRSLSDAPAYIQGDVPEWVQSSLETAFGERWLAEAQALNERPTLDLRAN
TLKATRDKVLKALEESGAEATRIARQGLRIPAGEGPSRLPNVTAELSFQKGWFEVQDEGSQIVADLAGAREGEQVLDYCA
GGGGKTLAMAASMNNKGQVHAFDADRKRLAPIIERLKRAGTRNVQVHDRAAGLAPFQEKFDRVLVDAPCTGTGTWRRRPD
TKWRLTARNLEERVQQQGEALSQAKGFVRPGGELLYVTCSVLPEENEQQVRRFCEENPEFAIGSALERWQSIFSGNANKP
HSSDGKTVTLTPATTDTDGFFFCLMKRKA
>Mature_429_residues
MRLGGRLAGAIEVLADIEGRRRPVADALKDWGLAHRFAGSGDRAAIGNIVYDALRMKLSHAWLMDDDSAASLAYAVLLRQ
WGKSFAELTAEFDGDKFAPAAPDAERQQAFLSRSLSDAPAYIQGDVPEWVQSSLETAFGERWLAEAQALNERPTLDLRAN
TLKATRDKVLKALEESGAEATRIARQGLRIPAGEGPSRLPNVTAELSFQKGWFEVQDEGSQIVADLAGAREGEQVLDYCA
GGGGKTLAMAASMNNKGQVHAFDADRKRLAPIIERLKRAGTRNVQVHDRAAGLAPFQEKFDRVLVDAPCTGTGTWRRRPD
TKWRLTARNLEERVQQQGEALSQAKGFVRPGGELLYVTCSVLPEENEQQVRRFCEENPEFAIGSALERWQSIFSGNANKP
HSSDGKTVTLTPATTDTDGFFFCLMKRKA

Specific function: Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA [H]

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI76150625, Length=329, Percent_Identity=30.0911854103343, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI76150623, Length=329, Percent_Identity=30.0911854103343, Blast_Score=107, Evalue=3e-23,
Organism=Homo sapiens, GI8922322, Length=232, Percent_Identity=31.4655172413793, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI270288816, Length=232, Percent_Identity=31.4655172413793, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI270288818, Length=232, Percent_Identity=31.4655172413793, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI23199998, Length=232, Percent_Identity=31.4655172413793, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI32698918, Length=173, Percent_Identity=31.2138728323699, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI301336155, Length=193, Percent_Identity=29.5336787564767, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI39995082, Length=193, Percent_Identity=29.5336787564767, Blast_Score=69, Evalue=9e-12,
Organism=Escherichia coli, GI2367212, Length=361, Percent_Identity=31.3019390581717, Blast_Score=154, Evalue=8e-39,
Organism=Escherichia coli, GI87081985, Length=278, Percent_Identity=29.8561151079137, Blast_Score=96, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17536757, Length=296, Percent_Identity=31.4189189189189, Blast_Score=103, Evalue=2e-22,
Organism=Saccharomyces cerevisiae, GI6324268, Length=325, Percent_Identity=29.2307692307692, Blast_Score=97, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6319447, Length=174, Percent_Identity=30.4597701149425, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI22024126, Length=292, Percent_Identity=29.1095890410959, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21356579, Length=221, Percent_Identity=30.316742081448, Blast_Score=95, Evalue=8e-20,
Organism=Drosophila melanogaster, GI24668781, Length=205, Percent_Identity=30.2439024390244, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI21356513, Length=201, Percent_Identity=29.8507462686567, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21355201, Length=191, Percent_Identity=28.7958115183246, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR006027
- InterPro:   IPR004573 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu; PF01029 NusB [H]

EC number: =2.1.1.176 [H]

Molecular weight: Translated: 47087; Mature: 47087

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS01153 NOL1_NOP2_SUN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLGGRLAGAIEVLADIEGRRRPVADALKDWGLAHRFAGSGDRAAIGNIVYDALRMKLSH
CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AWLMDDDSAASLAYAVLLRQWGKSFAELTAEFDGDKFAPAAPDAERQQAFLSRSLSDAPA
HEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
YIQGDVPEWVQSSLETAFGERWLAEAQALNERPTLDLRANTLKATRDKVLKALEESGAEA
EEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHH
TRIARQGLRIPAGEGPSRLPNVTAELSFQKGWFEVQDEGSQIVADLAGAREGEQVLDYCA
HHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCHHHHHHHHCCCCHHHHHHHHC
GGGGKTLAMAASMNNKGQVHAFDADRKRLAPIIERLKRAGTRNVQVHDRAAGLAPFQEKF
CCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEHHHCCCCHHHHHH
DRVLVDAPCTGTGTWRRRPDTKWRLTARNLEERVQQQGEALSQAKGFVRPGGELLYVTCS
CCEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
VLPEENEQQVRRFCEENPEFAIGSALERWQSIFSGNANKPHSSDGKTVTLTPATTDTDGF
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCE
FFCLMKRKA
EEEEEECCC
>Mature Secondary Structure
MRLGGRLAGAIEVLADIEGRRRPVADALKDWGLAHRFAGSGDRAAIGNIVYDALRMKLSH
CCCCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AWLMDDDSAASLAYAVLLRQWGKSFAELTAEFDGDKFAPAAPDAERQQAFLSRSLSDAPA
HEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
YIQGDVPEWVQSSLETAFGERWLAEAQALNERPTLDLRANTLKATRDKVLKALEESGAEA
EEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCHHH
TRIARQGLRIPAGEGPSRLPNVTAELSFQKGWFEVQDEGSQIVADLAGAREGEQVLDYCA
HHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCEEECCCCHHHHHHHHCCCCHHHHHHHHC
GGGGKTLAMAASMNNKGQVHAFDADRKRLAPIIERLKRAGTRNVQVHDRAAGLAPFQEKF
CCCCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEHHHCCCCHHHHHH
DRVLVDAPCTGTGTWRRRPDTKWRLTARNLEERVQQQGEALSQAKGFVRPGGELLYVTCS
CCEEECCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
VLPEENEQQVRRFCEENPEFAIGSALERWQSIFSGNANKPHSSDGKTVTLTPATTDTDGF
CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCE
FFCLMKRKA
EEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA