Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184243
Identifier: 159184243
GI number: 159184243
Start: 282202
End: 283479
Strand: Reverse
Name: 159184243
Synonym: Atu0288
Alternate gene names: NA
Gene position: 283479-282202 (Counterclockwise)
Preceding gene: 15887638
Following gene: 15887636
Centisome position: 9.98
GC content: 59.15
Gene sequence:
>1278_bases ATGATCCGCAAAACCATTCTCAGCGCGTCTTTCGTGCTTCTGGCCGCATCGGCGGCCTTCACCGCGCTTCCCGCACAGGC TGCCACCGACGCTGCCGCCGTCATCAAGCATTATGCCGATGTCGCGCATGCCAAATACGAGGATTCGCTGACCACGGCGA AGGCGCTGGACAAGGCTATCGACGCTCTGATCGCAACGCCGAGCGAAGAAACCCTCAAAGCCGCGCGCGAAGCCTGGATC AAGGCACGTGTTCCCTACCAGCAGTCGGAAGTCTACCGCTTCGGCAATCCGCTTGTCGATGCTTGGGAAGGCAAGGTGAA TGCGTGGCCGCTGGATGAAGGCCTGATCGACTATGTCGACGCCTCTTACGGCACCGAAAGCGACGAGAACGAACTTTACG TCGCAAACATCATCGCCAATCCGAAGATCAAGATCAGCGGCGAAGAGGTCGATGCCTCCAAGATCACCCCGGAACTGATC GAAAGCCTGCACGAGGCGGGCGATGTCGAAGCCAATGTGACGACCGGTTATCACGCCATCGAATTTCTGCTCTGGGGCCA GGATCTGAACGGCACCGGGCCGGGCGCGGGCAACCGCCCCTATACCGACTATGACAAGGCAAAATGCACGAATGGCAATT GCGACCGCCGCGCCGATTACCTGAAATCCGCATCGAGTCTGCTGGTCAAGGACTTGCAGGAGATGGTAGACGCCTGGGCG CCGGAGGGTGAAGCCACGAAGACGGTGGAAGCCGATCCGAAAGCGGGCCTCACCGCCATTCTGACCGGCATGGGCTCACT CTCCTATGGTGAGCTGGCGGGCGAGCGCATGAAGCTCGGCCTGCTGCTGCACGATCCGGAAGAAGAGCATGATTGCTTCT CCGACAACACCTATAACTCCCATCTCAACGACGCCATCGGCATCGCTTCGGCCTATACCGGCGACTATACCCGCGTCGAC GGCACGAAGATGACCGGCGCCTCGCTGGCAGAACTCGTCGGCGCCAAGGACAAGGCGCTAAACGACGAAATGACGGCGAA GCTGAACAAGACGCTGAATGCCATGCATGCGATGGAAAAGCGCGCCCAGACGGTTGAAGCTTATGACCAGATGATCGGCG AAGGCAACAAGGAAGGCAACGCCGTGGTTCAGGCGGCCATCGACGGTCTCATTGACCAGACGAAGACCGTTGAACGTGTC ATCGCGGCACTTGATCTTGGTAAGATCGAGCTTGAAGGCTCCGCGAGCCTCGACAACCCGAACGCCGTCTTCAAATAA
Upstream 100 bases:
>100_bases AAGCATTCTAAACTAGAATGTTTGACACAAGTTTGTGATTGGGTCAGAACTCGCTGGCCGCAGCCTGATGTCTTTTCATG GCTGCCCAAGGAGAGGGATC
Downstream 100 bases:
>100_bases GCGGCAAGGCGGGCCGCGATCCACTGCGGCCCGCCTACCAAATGTGCCTTCCGACCCCCATGGAATTGTCGCTGTCCCCG ATCCGCAAGCCGTTTTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: Iron-Regulated Protein A; Insulin-Cleaving Metalloproteinase Outer Membrane Protein; Peptidase; Imelysin; Lipoprotein; Peptidase Imelysin Family; Insulin-Cleaving Metalloproteinase Outer Membrane; Iron-Regulated Lipoprotein; Imelysin Family; Exported Protein
Number of amino acids: Translated: 425; Mature: 425
Protein sequence:
>425_residues MIRKTILSASFVLLAASAAFTALPAQAATDAAAVIKHYADVAHAKYEDSLTTAKALDKAIDALIATPSEETLKAAREAWI KARVPYQQSEVYRFGNPLVDAWEGKVNAWPLDEGLIDYVDASYGTESDENELYVANIIANPKIKISGEEVDASKITPELI ESLHEAGDVEANVTTGYHAIEFLLWGQDLNGTGPGAGNRPYTDYDKAKCTNGNCDRRADYLKSASSLLVKDLQEMVDAWA PEGEATKTVEADPKAGLTAILTGMGSLSYGELAGERMKLGLLLHDPEEEHDCFSDNTYNSHLNDAIGIASAYTGDYTRVD GTKMTGASLAELVGAKDKALNDEMTAKLNKTLNAMHAMEKRAQTVEAYDQMIGEGNKEGNAVVQAAIDGLIDQTKTVERV IAALDLGKIELEGSASLDNPNAVFK
Sequences:
>Translated_425_residues MIRKTILSASFVLLAASAAFTALPAQAATDAAAVIKHYADVAHAKYEDSLTTAKALDKAIDALIATPSEETLKAAREAWI KARVPYQQSEVYRFGNPLVDAWEGKVNAWPLDEGLIDYVDASYGTESDENELYVANIIANPKIKISGEEVDASKITPELI ESLHEAGDVEANVTTGYHAIEFLLWGQDLNGTGPGAGNRPYTDYDKAKCTNGNCDRRADYLKSASSLLVKDLQEMVDAWA PEGEATKTVEADPKAGLTAILTGMGSLSYGELAGERMKLGLLLHDPEEEHDCFSDNTYNSHLNDAIGIASAYTGDYTRVD GTKMTGASLAELVGAKDKALNDEMTAKLNKTLNAMHAMEKRAQTVEAYDQMIGEGNKEGNAVVQAAIDGLIDQTKTVERV IAALDLGKIELEGSASLDNPNAVFK >Mature_425_residues MIRKTILSASFVLLAASAAFTALPAQAATDAAAVIKHYADVAHAKYEDSLTTAKALDKAIDALIATPSEETLKAAREAWI KARVPYQQSEVYRFGNPLVDAWEGKVNAWPLDEGLIDYVDASYGTESDENELYVANIIANPKIKISGEEVDASKITPELI ESLHEAGDVEANVTTGYHAIEFLLWGQDLNGTGPGAGNRPYTDYDKAKCTNGNCDRRADYLKSASSLLVKDLQEMVDAWA PEGEATKTVEADPKAGLTAILTGMGSLSYGELAGERMKLGLLLHDPEEEHDCFSDNTYNSHLNDAIGIASAYTGDYTRVD GTKMTGASLAELVGAKDKALNDEMTAKLNKTLNAMHAMEKRAQTVEAYDQMIGEGNKEGNAVVQAAIDGLIDQTKTVERV IAALDLGKIELEGSASLDNPNAVFK
Specific function: Unknown
COG id: COG3487
COG function: function code P; Uncharacterized iron-regulated protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45641; Mature: 45641
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRKTILSASFVLLAASAAFTALPAQAATDAAAVIKHYADVAHAKYEDSLTTAKALDKAI CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALIATPSEETLKAAREAWIKARVPYQQSEVYRFGNPLVDAWEGKVNAWPLDEGLIDYVD HHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHH ASYGTESDENELYVANIIANPKIKISGEEVDASKITPELIESLHEAGDVEANVTTGYHAI CCCCCCCCCCCEEEEEEECCCEEEECCCCCCHHCCCHHHHHHHHHHCCCCEEEECCHHEE EFLLWGQDLNGTGPGAGNRPYTDYDKAKCTNGNCDRRADYLKSASSLLVKDLQEMVDAWA EHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC PEGEATKTVEADPKAGLTAILTGMGSLSYGELAGERMKLGLLLHDPEEEHDCFSDNTYNS CCCCCCCEECCCCCCCHHHHHHHCCCCCHHHHCCCCEEEEEEEECCCHHHCCCCCCCCCH HLNDAIGIASAYTGDYTRVDGTKMTGASLAELVGAKDKALNDEMTAKLNKTLNAMHAMEK HHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHH RAQTVEAYDQMIGEGNKEGNAVVQAAIDGLIDQTKTVERVIAALDLGKIELEGSASLDNP HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC NAVFK CCCCC >Mature Secondary Structure MIRKTILSASFVLLAASAAFTALPAQAATDAAAVIKHYADVAHAKYEDSLTTAKALDKAI CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DALIATPSEETLKAAREAWIKARVPYQQSEVYRFGNPLVDAWEGKVNAWPLDEGLIDYVD HHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHCCCCCCCCCCCHHHHHHH ASYGTESDENELYVANIIANPKIKISGEEVDASKITPELIESLHEAGDVEANVTTGYHAI CCCCCCCCCCCEEEEEEECCCEEEECCCCCCHHCCCHHHHHHHHHHCCCCEEEECCHHEE EFLLWGQDLNGTGPGAGNRPYTDYDKAKCTNGNCDRRADYLKSASSLLVKDLQEMVDAWA EHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC PEGEATKTVEADPKAGLTAILTGMGSLSYGELAGERMKLGLLLHDPEEEHDCFSDNTYNS CCCCCCCEECCCCCCCHHHHHHHCCCCCHHHHCCCCEEEEEEEECCCHHHCCCCCCCCCH HLNDAIGIASAYTGDYTRVDGTKMTGASLAELVGAKDKALNDEMTAKLNKTLNAMHAMEK HHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHH RAQTVEAYDQMIGEGNKEGNAVVQAAIDGLIDQTKTVERVIAALDLGKIELEGSASLDNP HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCC NAVFK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA