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The map label for this gene is ctpI

Identifier: 15887568

GI number: 15887568

Start: 220902

End: 221888

Strand: Reverse

Name: ctpI

Synonym: Atu0216

Alternate gene names: NA

Gene position: 221888-220902 (Counterclockwise)

Preceding gene: 15887569

Following gene: 15887566

Centisome position: 7.81

GC content: 56.74

Gene sequence:

>987_bases
ATGACAGGAGATCTTTTTTCCCGCCTGACGGATCCGCAGACGATCATAGCCATTCTCGTGACGCTCGCGGTTTTCGCGAC
CCTCTATACGCTGATCATGCCTTTCCTGGAGCGGAAAGACCTCGCCAAGCGCATGAAAGCCGTTTCGTCTGAACGGGAAC
TCATTCGCAGCCGCGAACGCGAGCGCCTGGCGACTGTGACCCGCGACGGCAGAACATCCCTTCGCGGCAACAATAATAAA
TCCGCGCGGCGCATCGTGGAAAAATTCAATCTTCGGGAAGCGCTTGCCGACCAGAACACGATGAACAAGCTGCGTGCCGC
CGGTTTCCGTTCACAGAATGCGCTCAATACATTTCTTGCCGCCCGGTTCGTCTTGCCGTTCATTTTCCTGGCGGTGGCAT
TCACTTGGGTTTTCGTGCTCGGAAACCTGGCTGACAAGGCTTTTGTCGTTCGGCTGATGGCCGTGCTTGTTTTCGGCTAT
ATCGGTTTTTACGCCCCCAATATCTATGTCTCTAACCGCATGACCAAGCGGCAGGCCTCTATCAAGCGGGCATGGCCGGA
TGCGCTCGATCTGATGCTGATCTGCATCGAATCTGGCGTGTCAATGGAATCGGCAATGCGTCGTGTGGCGGAGGAAATGG
GTGAGCAATCGCCTGAACTGGCGGAGGAGATGATCCTGACGACGGCCGAACTGTCTTTCCTCCAGGACAGGCGCACGGCT
CTTGAGAATTTCGGTATGCGTACCCAGCTGGACGGCGTCAAAAGTGTGGTGCAGGCTCTTATCCAGGCAGAACGGTATGG
AACCCCGCTCGCTCAGGCGCTGCGTGTTCTTGCGCAGGAAGGCCGCGACGAGCGCATGAATGAGGCCGAGAAAAAGGCTG
CCGCTTTGCCGCCGAAACTGACCGTGCCGATGATCATATTTTTCCTGCCGGTCCTAATCGCGGTCATTCTCGGGCCAGCT
GGCATTCGCGTTGCCGATACGTTCTGA

Upstream 100 bases:

>100_bases
TACGCGCGGACACCTCATTCTGGGTGCATCCGCAATATGGATGCTCATCGGGATTTTCATTATGCGTCAAATGATCAACT
TCGATATTTGAGAGGCGACG

Downstream 100 bases:

>100_bases
CGTTTACGCACAGCAGCAATCATTTATCTGCCGGGCCGCACTACAAATGTTTCAGAAAACCCATCAACCAGCCGGCTTGC
GGTCTTTCTTCGCCAGCTGC

Product: components of type IV pilus

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; TadC Pilus Assembly Protein; Integral Membrane Protein; TadC Family Type II/IV Secretion System Protein; Type II Secretion System; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain; Type II Secretion System Protein F Domain Protein; Bipartite Nuclear Localization Signal Containing Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Fimbriae-Related Membrane Protein; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; TadC Subunit; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Von Willebrand Factor Type A; Component Of Type IV Pilus; Type II Secretion System Protein F; Type II Secretion System Integral Membrane Subunit; Component Of Pilus Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTGDLFSRLTDPQTIIAILVTLAVFATLYTLIMPFLERKDLAKRMKAVSSERELIRSRERERLATVTRDGRTSLRGNNNK
SARRIVEKFNLREALADQNTMNKLRAAGFRSQNALNTFLAARFVLPFIFLAVAFTWVFVLGNLADKAFVVRLMAVLVFGY
IGFYAPNIYVSNRMTKRQASIKRAWPDALDLMLICIESGVSMESAMRRVAEEMGEQSPELAEEMILTTAELSFLQDRRTA
LENFGMRTQLDGVKSVVQALIQAERYGTPLAQALRVLAQEGRDERMNEAEKKAAALPPKLTVPMIIFFLPVLIAVILGPA
GIRVADTF

Sequences:

>Translated_328_residues
MTGDLFSRLTDPQTIIAILVTLAVFATLYTLIMPFLERKDLAKRMKAVSSERELIRSRERERLATVTRDGRTSLRGNNNK
SARRIVEKFNLREALADQNTMNKLRAAGFRSQNALNTFLAARFVLPFIFLAVAFTWVFVLGNLADKAFVVRLMAVLVFGY
IGFYAPNIYVSNRMTKRQASIKRAWPDALDLMLICIESGVSMESAMRRVAEEMGEQSPELAEEMILTTAELSFLQDRRTA
LENFGMRTQLDGVKSVVQALIQAERYGTPLAQALRVLAQEGRDERMNEAEKKAAALPPKLTVPMIIFFLPVLIAVILGPA
GIRVADTF
>Mature_327_residues
TGDLFSRLTDPQTIIAILVTLAVFATLYTLIMPFLERKDLAKRMKAVSSERELIRSRERERLATVTRDGRTSLRGNNNKS
ARRIVEKFNLREALADQNTMNKLRAAGFRSQNALNTFLAARFVLPFIFLAVAFTWVFVLGNLADKAFVVRLMAVLVFGYI
GFYAPNIYVSNRMTKRQASIKRAWPDALDLMLICIESGVSMESAMRRVAEEMGEQSPELAEEMILTTAELSFLQDRRTAL
ENFGMRTQLDGVKSVVQALIQAERYGTPLAQALRVLAQEGRDERMNEAEKKAAALPPKLTVPMIIFFLPVLIAVILGPAG
IRVADTF

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36814; Mature: 36683

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGDLFSRLTDPQTIIAILVTLAVFATLYTLIMPFLERKDLAKRMKAVSSERELIRSRER
CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLATVTRDGRTSLRGNNNKSARRIVEKFNLREALADQNTMNKLRAAGFRSQNALNTFLA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHH
ARFVLPFIFLAVAFTWVFVLGNLADKAFVVRLMAVLVFGYIGFYAPNIYVSNRMTKRQAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHH
IKRAWPDALDLMLICIESGVSMESAMRRVAEEMGEQSPELAEEMILTTAELSFLQDRRTA
HHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LENFGMRTQLDGVKSVVQALIQAERYGTPLAQALRVLAQEGRDERMNEAEKKAAALPPKL
HHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCH
TVPMIIFFLPVLIAVILGPAGIRVADTF
HHHHHHHHHHHHHHHHHCCCCCEECCCC
>Mature Secondary Structure 
TGDLFSRLTDPQTIIAILVTLAVFATLYTLIMPFLERKDLAKRMKAVSSERELIRSRER
CCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ERLATVTRDGRTSLRGNNNKSARRIVEKFNLREALADQNTMNKLRAAGFRSQNALNTFLA
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHH
ARFVLPFIFLAVAFTWVFVLGNLADKAFVVRLMAVLVFGYIGFYAPNIYVSNRMTKRQAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHH
IKRAWPDALDLMLICIESGVSMESAMRRVAEEMGEQSPELAEEMILTTAELSFLQDRRTA
HHHHCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
LENFGMRTQLDGVKSVVQALIQAERYGTPLAQALRVLAQEGRDERMNEAEKKAAALPPKL
HHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCH
TVPMIIFFLPVLIAVILGPAGIRVADTF
HHHHHHHHHHHHHHHHHCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA