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The map label for this gene is ctpH

Identifier: 15887569

GI number: 15887569

Start: 221898

End: 222902

Strand: Reverse

Name: ctpH

Synonym: Atu0217

Alternate gene names: NA

Gene position: 222902-221898 (Counterclockwise)

Preceding gene: 159184215

Following gene: 15887568

Centisome position: 7.84

GC content: 54.93

Gene sequence:

>1005_bases
ATGGACCCGACAATAGTGTTACTGGCCGTACTCGTCGCCATATCGGCAGGAGCGCTCGCCTATGCCTTTCTTTTCCAGCA
GATAGAGGTCGAGAAAAAGACCACCAGCCGCTTCAAGCGCGTGCAGGCCGCAGAGACGGATCATACAAATATCAAGGCTG
CGCGCGACCGGGTCCAGGAACTCAGCAAGCGCCGCAAATCCATGCAGGACAGCCTGCGGGACATGGAAAAGAAACAGAAT
GAGAAGGCAAAAAAAGCAAAGAATGTCAGCCTGCGCGATAAACTCGTGCAGGCAGGGCTCACAATTTCCGTTCGGCAATT
CCACCTTCTGAGCGCCGGCGCGGCGGCTTGTGCCGCTTTCATCTCACTTATCTATGGTCTGTCCTTGTTGACCGCCCTCC
CGATAGCCGTCGTCGCGGCTTTGGGACTGCCGCGCTGGGTATTGGCATTTCTCCTCAAACGCCGGCAGAAAAAATTTCTT
GAGGAGTTTCCCAATGCGCTTGATGTCATGTGCCGCTCGATCAAATCAGGTTTGCCGCTGAACGATGCGGTACGACTGAT
CGCCTCAGACGGCCAGGAACCGGTAAAAACGGAGTTCCAGCGGGTTGTCGATGCGCAGCAGGTCGGCATCGGCATTCCCC
AGGGAATCGAGCGCATGATGCTGACCATGCCGCTTTTCGAAGTCAGCTTCTTCAGCATCGTCATCAACATCCAGGCACAG
GCAGGCGGCAACCTTTCGGAGGCATTGTCTAACCTCTCGAGGGTGTTGCGAGATCGTAGAAAGATGCGCGCCAAGGTGAA
TGCCCTGTCGATGGAGGCGAAAGCGTCCGCCGTCATCATTGGCGCACTGCCTTTCATCGTGATGCTGCTGGTGCATTTCA
CGTCGCCGGACTACCTCTCGATACTTTTCACGGATACGCGCGGACACCTCATTCTGGGTGCATCCGCAATATGGATGCTC
ATCGGGATTTTCATTATGCGTCAAATGATCAACTTCGATATTTGA

Upstream 100 bases:

>100_bases
AGCCGCATTTCTGGGATCGTGCACGGTATTACGGCGAAGATAAACGTCTGGCGGCCGCGCTCGATGAGATGGAAAAGTCA
TCCTAAGGAAAGCGACCGCC

Downstream 100 bases:

>100_bases
GAGGCGACGATGACAGGAGATCTTTTTTCCCGCCTGACGGATCCGCAGACGATCATAGCCATTCTCGTGACGCTCGCGGT
TTTCGCGACCCTCTATACGC

Product: components of type IV pilus

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadB Protein; Type II Secretion System Protein F; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System Protein F Domain; Tad Secretion System Pilus Assembly Protein; Bacterial Type II Secretion System Protein F; Secretion System Protein; Type II Secretion System; MaoC Protein; Flp Pilus Assembly Protein Tadb; Secretion System Protein TadB; Sercretion System Protein; Tight Adherence TadB-Related Transmembrane Protein; Tight Adherence Protein B; Transmembrane Pilus Component Protein; Bacterial Type II Secretion System Protein F Domain Protein; Flp Pilus Assembly Protein TadC; Integral Membrane Protein; TadB-Like Pilus Assembly Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MDPTIVLLAVLVAISAGALAYAFLFQQIEVEKKTTSRFKRVQAAETDHTNIKAARDRVQELSKRRKSMQDSLRDMEKKQN
EKAKKAKNVSLRDKLVQAGLTISVRQFHLLSAGAAACAAFISLIYGLSLLTALPIAVVAALGLPRWVLAFLLKRRQKKFL
EEFPNALDVMCRSIKSGLPLNDAVRLIASDGQEPVKTEFQRVVDAQQVGIGIPQGIERMMLTMPLFEVSFFSIVINIQAQ
AGGNLSEALSNLSRVLRDRRKMRAKVNALSMEAKASAVIIGALPFIVMLLVHFTSPDYLSILFTDTRGHLILGASAIWML
IGIFIMRQMINFDI

Sequences:

>Translated_334_residues
MDPTIVLLAVLVAISAGALAYAFLFQQIEVEKKTTSRFKRVQAAETDHTNIKAARDRVQELSKRRKSMQDSLRDMEKKQN
EKAKKAKNVSLRDKLVQAGLTISVRQFHLLSAGAAACAAFISLIYGLSLLTALPIAVVAALGLPRWVLAFLLKRRQKKFL
EEFPNALDVMCRSIKSGLPLNDAVRLIASDGQEPVKTEFQRVVDAQQVGIGIPQGIERMMLTMPLFEVSFFSIVINIQAQ
AGGNLSEALSNLSRVLRDRRKMRAKVNALSMEAKASAVIIGALPFIVMLLVHFTSPDYLSILFTDTRGHLILGASAIWML
IGIFIMRQMINFDI
>Mature_334_residues
MDPTIVLLAVLVAISAGALAYAFLFQQIEVEKKTTSRFKRVQAAETDHTNIKAARDRVQELSKRRKSMQDSLRDMEKKQN
EKAKKAKNVSLRDKLVQAGLTISVRQFHLLSAGAAACAAFISLIYGLSLLTALPIAVVAALGLPRWVLAFLLKRRQKKFL
EEFPNALDVMCRSIKSGLPLNDAVRLIASDGQEPVKTEFQRVVDAQQVGIGIPQGIERMMLTMPLFEVSFFSIVINIQAQ
AGGNLSEALSNLSRVLRDRRKMRAKVNALSMEAKASAVIIGALPFIVMLLVHFTSPDYLSILFTDTRGHLILGASAIWML
IGIFIMRQMINFDI

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37023; Mature: 37023

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEEECCCCCEEECHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure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EEEECCCCCEEECHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA