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The map label for this gene is recR

Identifier: 15887447

GI number: 15887447

Start: 97808

End: 98413

Strand: Reverse

Name: recR

Synonym: Atu0093

Alternate gene names: 15887447

Gene position: 98413-97808 (Counterclockwise)

Preceding gene: 15887449

Following gene: 15887446

Centisome position: 3.46

GC content: 61.39

Gene sequence:

>606_bases
ATGGCAAAACGAGTCACCGGTCCCGAAATTGAAAAACTGATCCAGCTTCTGGCAAAAGTGCCGGGGCTTGGCCCCCGCTC
GGCGCGGCGGGCGGCATTGCATCTCATCAAGAAGAAAGAACAGCTTCTCGGGCCGCTCGGCCATGCCATGGGCGAAGCCT
ATGACAAGGTGAAGATCTGCTCCTGCTGCGGCAATGTCGATACGATCGATCCCTGCACTGTCTGCGCCGATGACCGGCGT
GACCAGTCCGTCATCATCGTGGTGGAAGACGTGTCGGATCTCTGGGCACTGGAGCGGGCGGGCGCGATGAACACAGCCTA
TCACGTTCTGGGTGGCACACTGTCACCGCTCGATGGCGTCGGACCGGAGGACCTGAACATCAAGGGCCTGATCGACCGCG
TGAGTGCTGGCGGCATTCGCGAGCTCATCATCGCCGTCAATGCGACGGTGGAAGGACAGGCGACTGCCCATTACATCACA
GACCGCCTCTCCGGCCTCGGCATCAAGATCACGAGGCTCGCCCATGGCGTGCCTGTGGGCGGTGAGCTTGATTATCTCGA
CGAGGGCACATTGACGGCGGCGCTTCGGGCGCGAACGACGATCTGA

Upstream 100 bases:

>100_bases
CAGGCTTTTTGCCTCGCCCCGGCACACCGCCCTGATTTTCATCGACTGCCCTTCAAGCTTCATGATTCCCGTTTCCCGAT
TTATGCAGTAGAAAGCGCTC

Downstream 100 bases:

>100_bases
AGCCTTCCCTCCCCACCATCCAAGAGGAGACCGAATGCCACACCGATTTGCTACCAAGGCACTGGCCGCCATTCTTTCCG
TTTTTTCAGCAACGACAGTT

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKEQLLGPLGHAMGEAYDKVKICSCCGNVDTIDPCTVCADDRR
DQSVIIVVEDVSDLWALERAGAMNTAYHVLGGTLSPLDGVGPEDLNIKGLIDRVSAGGIRELIIAVNATVEGQATAHYIT
DRLSGLGIKITRLAHGVPVGGELDYLDEGTLTAALRARTTI

Sequences:

>Translated_201_residues
MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKEQLLGPLGHAMGEAYDKVKICSCCGNVDTIDPCTVCADDRR
DQSVIIVVEDVSDLWALERAGAMNTAYHVLGGTLSPLDGVGPEDLNIKGLIDRVSAGGIRELIIAVNATVEGQATAHYIT
DRLSGLGIKITRLAHGVPVGGELDYLDEGTLTAALRARTTI
>Mature_200_residues
AKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKEQLLGPLGHAMGEAYDKVKICSCCGNVDTIDPCTVCADDRRD
QSVIIVVEDVSDLWALERAGAMNTAYHVLGGTLSPLDGVGPEDLNIKGLIDRVSAGGIRELIIAVNATVEGQATAHYITD
RLSGLGIKITRLAHGVPVGGELDYLDEGTLTAALRARTTI

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=197, Percent_Identity=38.5786802030457, Blast_Score=146, Evalue=1e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_AGRT5 (Q8UJ45)

Other databases:

- EMBL:   AE007869
- PIR:   AH2587
- PIR:   H97369
- RefSeq:   NP_353128.1
- ProteinModelPortal:   Q8UJ45
- SMR:   Q8UJ45
- STRING:   Q8UJ45
- GeneID:   1132131
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu0093
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   ATUM176299-1:ATU0093-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21326; Mature: 21195

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKEQLLGPLGHAMGEAYDKVKIC
CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCCGNVDTIDPCTVCADDRRDQSVIIVVEDVSDLWALERAGAMNTAYHVLGGTLSPLDGV
HHCCCCCCCCCCEECCCCCCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHCCCCCCCCCC
GPEDLNIKGLIDRVSAGGIRELIIAVNATVEGQATAHYITDRLSGLGIKITRLAHGVPVG
CCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEHHHCCCCCC
GELDYLDEGTLTAALRARTTI
CCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
AKRVTGPEIEKLIQLLAKVPGLGPRSARRAALHLIKKKEQLLGPLGHAMGEAYDKVKIC
CCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SCCGNVDTIDPCTVCADDRRDQSVIIVVEDVSDLWALERAGAMNTAYHVLGGTLSPLDGV
HHCCCCCCCCCCEECCCCCCCCEEEEEEECCHHHHHHHHCCCCHHHHHHHCCCCCCCCCC
GPEDLNIKGLIDRVSAGGIRELIIAVNATVEGQATAHYITDRLSGLGIKITRLAHGVPVG
CCCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEHHHCCCCCC
GELDYLDEGTLTAALRARTTI
CCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194