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The map label for this gene is ybaB [C]

Identifier: 15887449

GI number: 15887449

Start: 99146

End: 99469

Strand: Reverse

Name: ybaB [C]

Synonym: Atu0095

Alternate gene names: 15887449

Gene position: 99469-99146 (Counterclockwise)

Preceding gene: 15887450

Following gene: 15887447

Centisome position: 3.5

GC content: 57.72

Gene sequence:

>324_bases
ATGCGCGACATCATGGGTATGATGGGCAAGGTCAAGGAAATGCAGTCCAAGATGGAGAAGGTGCAGCAGGAAATTGCCGC
CCTCGAAATCGAAGGCCGGGCCGGTGGCGGTCTGGTGACCGTCATTTTGAACGGCAAGGGCGAAATGCGCGGCCTGAAAA
TCGATCCTTCGCTCTTCAAGGAAGACGAGGTCGAAATCCTCGAGGATCTGATCGTTGCGGCCCACAAGGACGCCAAGGAA
AAGGGTGAAGCGCAGGCCCAGGAAAAGATGGCTGACCTGACCGCAGGTCTGCCGCTACCGCCCGGCATGAAGCTGCCTTT
CTGA

Upstream 100 bases:

>100_bases
GGAGGATATCACCCCGCCATCGGTTGCCGAATCGAGCGAAGGCGACATCCTTCCCGGCGACGACATCGAGTTTTAAACAA
GAAGAACAGGAGATTGGCAC

Downstream 100 bases:

>100_bases
GATATTCCAACTGAAGAGGATGGCGTTGAGCATTCGCCATCCTCATCTCAGGACACGGCCTAAGATTCCAGCATCGCACG
AAATCGGCTTGCGAGCGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MRDIMGMMGKVKEMQSKMEKVQQEIAALEIEGRAGGGLVTVILNGKGEMRGLKIDPSLFKEDEVEILEDLIVAAHKDAKE
KGEAQAQEKMADLTAGLPLPPGMKLPF

Sequences:

>Translated_107_residues
MRDIMGMMGKVKEMQSKMEKVQQEIAALEIEGRAGGGLVTVILNGKGEMRGLKIDPSLFKEDEVEILEDLIVAAHKDAKE
KGEAQAQEKMADLTAGLPLPPGMKLPF
>Mature_107_residues
MRDIMGMMGKVKEMQSKMEKVQQEIAALEIEGRAGGGLVTVILNGKGEMRGLKIDPSLFKEDEVEILEDLIVAAHKDAKE
KGEAQAQEKMADLTAGLPLPPGMKLPF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

Organism=Escherichia coli, GI1786677, Length=102, Percent_Identity=49.0196078431373, Blast_Score=101, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y095_AGRT5 (Q8UJ43)

Other databases:

- EMBL:   AE007869
- PIR:   AB2588
- PIR:   B97370
- RefSeq:   NP_353130.1
- ProteinModelPortal:   Q8UJ43
- SMR:   Q8UJ43
- STRING:   Q8UJ43
- GeneID:   1132133
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu0095
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   MLQDLIL
- PhylomeDB:   Q8UJ43
- ProtClustDB:   PRK00153
- BioCyc:   ATUM176299-1:ATU0095-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 11650; Mature: 11650

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.4 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.4 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDIMGMMGKVKEMQSKMEKVQQEIAALEIEGRAGGGLVTVILNGKGEMRGLKIDPSLFK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECHHHCC
EDEVEILEDLIVAAHKDAKEKGEAQAQEKMADLTAGLPLPPGMKLPF
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRDIMGMMGKVKEMQSKMEKVQQEIAALEIEGRAGGGLVTVILNGKGEMRGLKIDPSLFK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEECHHHCC
EDEVEILEDLIVAAHKDAKEKGEAQAQEKMADLTAGLPLPPGMKLPF
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194