| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
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The map label for this gene is mrpA [H]
Identifier: 239618416
GI number: 239618416
Start: 2185443
End: 2187278
Strand: Reverse
Name: mrpA [H]
Synonym: Kole_2056
Alternate gene names: 239618416
Gene position: 2187278-2185443 (Counterclockwise)
Preceding gene: 239618417
Following gene: 239618415
Centisome position: 95.01
GC content: 40.96
Gene sequence:
>1836_bases ATGAGTTTAACCGTTCTCCTGACAATTAGTTTGATATCAGCACCGATTCTATACCTTCTGGCAAAAGTAAACAAAAACTT CGCATATACGGTTTATGCGTTGATACAGCTTTTCGCATTTTCTGCGATATTTTTTAACTGGATCTATATTCCCGAGCATT CGGGATTGAGAATTTTTTCCAACCTCGAACTGACGTTCAATGCCTCTATCTTGAATAGATTTTTTGCCTCAGTTACTATG CTAATAATCTCAATGACTGCGGTATTCATGCTTTCGATCAAGAAAAAGAAAGAAATGAAGTTAATGCTTTTGAGTCTTGT AAGTACCGGTGTAATCGGAAGTATGCTATCGAATGATTTCCTGACATTACTTATATTTTGGGAGTTAACAACATGGTCCT CATTGATCATGATTGTCCTCGATAAAAAGATAGCCTGGAAGGAAGCTCTCAAGTATGTAGCAGTCGGTTCAATAGGAACC TATTCAATGATGTACGCAGTATTTCTTCTTTACAACCGCTTTGGAACGCTCATCTATACAGATGTTGCAAATGAACTTAT GAAAACTTCTGGAGGATTTCAACTGTTAATCTTCATTTTATTAGCGGTAATGGCTTTTGCAAAAGCTGGAAGTTTTCCAT TGCACATCTGGTTGAGGGGAGCACATTCCTCCGCTCCGGACGAATTCAGCTCTATACTATCAGGAGCTTTAACGAAAATG GGAGCTTTCTTGATGTTCATCGTCGTTGCGGTACTTCCATCGACTAAATTTTTTGCATGGATGCCTGAGGTTCAGGGAAT TCCGCTGCCAAACTATATACTCGCCCTTCTAAGTGGCATCTCGATAATCGTCGGTACGGTGATGGCAATCCGAATGGAAG ACGCCAAGCAATTGATCGCTTTTTCTACAGTAAGTAATTCCGGATATATTTTGATGGCACTAGCCATAGGCGGGCCGTAT GCCACTGCTGGGGGATTGATGCATGTTCTAAATCACGCGCTTGCCTCTTCAGCTATGTTTCTCGCCATAGCGGCTGTTGC TCATCGAACAGGAACAACTAAGATGCACGAAATGGGTGGTTTGATTTTCAGAATGCCTTTCACTTTCACGGCTTATCTTG TAGCAATAATCTCCATTGCCGGGATACCACCAATGAGTGGCTTCGCTTCGAAATGGTTGATATACCAACAATTGGTACGT AATGGTTTACCATTCCTTGCTTTTATGGCGTTCTTTGGAAGCATCGGTTCTTTCATGTACGTGTTCAAACCTCTTGCCGG CATATTCCTTGGACAGTTGAAACCACAACATAAGAACATAAAAGAGGCACCGATACCGATGCTGGTATCTATGATGGTTC TCACTCTTCTAACGATATTCTGGGGAATACTTCCCAGCAACGCTATATCATTCACGAATAAAATAAGTGAACAGGTTGGA ATCGCCACGATAAAAACAACCTTTTCTGAAATCTTTGCTTCAACCGGAAAATGGGATTCAATCATAGTTGTAACGGTGTT CACCATAGGTTTTGTTATAGCATTTGTTATAAGTGCTCTCGCAAAGAAGCCAAAAAAGGTAGATTTAATGGATACATACA CAGGTGGGGAGTTCATTTACACTGCGGAACTCTATCACTTTTCTTACAAAATGTACCGTTCATTCGACAGAATGTTCGAA CGCTGGCCTTTGATGGAAAAATGGCTTGAAAATACGTCTTATAAACTGAGAGAACTTGGAGCCTTTTTCCGTAGCCTCTT CTATCCTTCAAGCCCACAAGGCTATGTAACTTTGAGCATTCTTGCAATACTAACAGCCTATTGGTGGTTGAGGTGA
Upstream 100 bases:
>100_bases AATAGCTTCACAAGGAGCTTTTGAAGTATTTGAAAAAGCTGGAACAGCCATACTCGATAGCTTATCCTATGCTTCTACGG TTCTTCTGGGAGGGATTTGA
Downstream 100 bases:
>100_bases TAGCATGACAGTGATAAAAAGTATTGGATTACTTTTATTAGCTTTCGTTTATACGATAACGCTGGAAGGTATTGCCAGAA AAATAGTTGCAAGGATAGAA
Product: NADH dehydrogenase subunit M
Products: NAD+; ubiquinol
Alternate protein names: Mrp complex subunit A; Multiple resistance and pH homeostasis protein A [H]
Number of amino acids: Translated: 611; Mature: 610
Protein sequence:
>611_residues MSLTVLLTISLISAPILYLLAKVNKNFAYTVYALIQLFAFSAIFFNWIYIPEHSGLRIFSNLELTFNASILNRFFASVTM LIISMTAVFMLSIKKKKEMKLMLLSLVSTGVIGSMLSNDFLTLLIFWELTTWSSLIMIVLDKKIAWKEALKYVAVGSIGT YSMMYAVFLLYNRFGTLIYTDVANELMKTSGGFQLLIFILLAVMAFAKAGSFPLHIWLRGAHSSAPDEFSSILSGALTKM GAFLMFIVVAVLPSTKFFAWMPEVQGIPLPNYILALLSGISIIVGTVMAIRMEDAKQLIAFSTVSNSGYILMALAIGGPY ATAGGLMHVLNHALASSAMFLAIAAVAHRTGTTKMHEMGGLIFRMPFTFTAYLVAIISIAGIPPMSGFASKWLIYQQLVR NGLPFLAFMAFFGSIGSFMYVFKPLAGIFLGQLKPQHKNIKEAPIPMLVSMMVLTLLTIFWGILPSNAISFTNKISEQVG IATIKTTFSEIFASTGKWDSIIVVTVFTIGFVIAFVISALAKKPKKVDLMDTYTGGEFIYTAELYHFSYKMYRSFDRMFE RWPLMEKWLENTSYKLRELGAFFRSLFYPSSPQGYVTLSILAILTAYWWLR
Sequences:
>Translated_611_residues MSLTVLLTISLISAPILYLLAKVNKNFAYTVYALIQLFAFSAIFFNWIYIPEHSGLRIFSNLELTFNASILNRFFASVTM LIISMTAVFMLSIKKKKEMKLMLLSLVSTGVIGSMLSNDFLTLLIFWELTTWSSLIMIVLDKKIAWKEALKYVAVGSIGT YSMMYAVFLLYNRFGTLIYTDVANELMKTSGGFQLLIFILLAVMAFAKAGSFPLHIWLRGAHSSAPDEFSSILSGALTKM GAFLMFIVVAVLPSTKFFAWMPEVQGIPLPNYILALLSGISIIVGTVMAIRMEDAKQLIAFSTVSNSGYILMALAIGGPY ATAGGLMHVLNHALASSAMFLAIAAVAHRTGTTKMHEMGGLIFRMPFTFTAYLVAIISIAGIPPMSGFASKWLIYQQLVR NGLPFLAFMAFFGSIGSFMYVFKPLAGIFLGQLKPQHKNIKEAPIPMLVSMMVLTLLTIFWGILPSNAISFTNKISEQVG IATIKTTFSEIFASTGKWDSIIVVTVFTIGFVIAFVISALAKKPKKVDLMDTYTGGEFIYTAELYHFSYKMYRSFDRMFE RWPLMEKWLENTSYKLRELGAFFRSLFYPSSPQGYVTLSILAILTAYWWLR >Mature_610_residues SLTVLLTISLISAPILYLLAKVNKNFAYTVYALIQLFAFSAIFFNWIYIPEHSGLRIFSNLELTFNASILNRFFASVTML IISMTAVFMLSIKKKKEMKLMLLSLVSTGVIGSMLSNDFLTLLIFWELTTWSSLIMIVLDKKIAWKEALKYVAVGSIGTY SMMYAVFLLYNRFGTLIYTDVANELMKTSGGFQLLIFILLAVMAFAKAGSFPLHIWLRGAHSSAPDEFSSILSGALTKMG AFLMFIVVAVLPSTKFFAWMPEVQGIPLPNYILALLSGISIIVGTVMAIRMEDAKQLIAFSTVSNSGYILMALAIGGPYA TAGGLMHVLNHALASSAMFLAIAAVAHRTGTTKMHEMGGLIFRMPFTFTAYLVAIISIAGIPPMSGFASKWLIYQQLVRN GLPFLAFMAFFGSIGSFMYVFKPLAGIFLGQLKPQHKNIKEAPIPMLVSMMVLTLLTIFWGILPSNAISFTNKISEQVGI ATIKTTFSEIFASTGKWDSIIVVTVFTIGFVIAFVISALAKKPKKVDLMDTYTGGEFIYTAELYHFSYKMYRSFDRMFER WPLMEKWLENTSYKLRELGAFFRSLFYPSSPQGYVTLSILAILTAYWWLR
Specific function: Mnh complex is a Na(+)Li(+)/H(+) antiporter involved in Na(+) and/or Li(+) excretion and Na(+) resistance. Na(+)/H(+) antiport consumes a transmembrane electrical potential, and is thus inferred to be electrogenic. Does not transport K(+), Ca(2+) or Mg(2+
COG id: COG0651
COG function: function code CP; Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CPA3 antiporters (TC 2.A.63) subunit A family [H]
Homologues:
Organism=Homo sapiens, GI251831117, Length=282, Percent_Identity=24.822695035461, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI251831116, Length=285, Percent_Identity=25.6140350877193, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1788827, Length=409, Percent_Identity=30.8068459657702, Blast_Score=136, Evalue=4e-33, Organism=Escherichia coli, GI1788831, Length=295, Percent_Identity=28.8135593220339, Blast_Score=118, Evalue=9e-28, Organism=Escherichia coli, GI2367154, Length=341, Percent_Identity=29.3255131964809, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI1788613, Length=366, Percent_Identity=26.5027322404372, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1788829, Length=363, Percent_Identity=24.7933884297521, Blast_Score=89, Evalue=7e-19, Organism=Escherichia coli, GI1788614, Length=363, Percent_Identity=25.068870523416, Blast_Score=80, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005663 - InterPro: IPR001750 - InterPro: IPR001516 [H]
Pfam domain/function: PF00361 Oxidored_q1; PF00662 Oxidored_q1_N [H]
EC number: 1.6.5.3
Molecular weight: Translated: 68163; Mature: 68032
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTVLLTISLISAPILYLLAKVNKNFAYTVYALIQLFAFSAIFFNWIYIPEHSGLRIFS CCEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEE NLELTFNASILNRFFASVTMLIISMTAVFMLSIKKKKEMKLMLLSLVSTGVIGSMLSNDF EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLLIFWELTTWSSLIMIVLDKKIAWKEALKYVAVGSIGTYSMMYAVFLLYNRFGTLIYT HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHEEH DVANELMKTSGGFQLLIFILLAVMAFAKAGSFPLHIWLRGAHSSAPDEFSSILSGALTKM HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH GAFLMFIVVAVLPSTKFFAWMPEVQGIPLPNYILALLSGISIIVGTVMAIRMEDAKQLIA HHHHHHHHHHHHCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSTVSNSGYILMALAIGGPYATAGGLMHVLNHALASSAMFLAIAAVAHRTGTTKMHEMGG HEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC LIFRMPFTFTAYLVAIISIAGIPPMSGFASKWLIYQQLVRNGLPFLAFMAFFGSIGSFMY EEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VFKPLAGIFLGQLKPQHKNIKEAPIPMLVSMMVLTLLTIFWGILPSNAISFTNKISEQVG HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC IATIKTTFSEIFASTGKWDSIIVVTVFTIGFVIAFVISALAKKPKKVDLMDTYTGGEFIY HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEE TAELYHFSYKMYRSFDRMFERWPLMEKWLENTSYKLRELGAFFRSLFYPSSPQGYVTLSI EEHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH LAILTAYWWLR HHHHHHHHHCC >Mature Secondary Structure SLTVLLTISLISAPILYLLAKVNKNFAYTVYALIQLFAFSAIFFNWIYIPEHSGLRIFS CEEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEEE NLELTFNASILNRFFASVTMLIISMTAVFMLSIKKKKEMKLMLLSLVSTGVIGSMLSNDF EEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTLLIFWELTTWSSLIMIVLDKKIAWKEALKYVAVGSIGTYSMMYAVFLLYNRFGTLIYT HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHEEH DVANELMKTSGGFQLLIFILLAVMAFAKAGSFPLHIWLRGAHSSAPDEFSSILSGALTKM HHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH GAFLMFIVVAVLPSTKFFAWMPEVQGIPLPNYILALLSGISIIVGTVMAIRMEDAKQLIA HHHHHHHHHHHHCCCHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSTVSNSGYILMALAIGGPYATAGGLMHVLNHALASSAMFLAIAAVAHRTGTTKMHEMGG HEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCC LIFRMPFTFTAYLVAIISIAGIPPMSGFASKWLIYQQLVRNGLPFLAFMAFFGSIGSFMY EEEECHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH VFKPLAGIFLGQLKPQHKNIKEAPIPMLVSMMVLTLLTIFWGILPSNAISFTNKISEQVG HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHC IATIKTTFSEIFASTGKWDSIIVVTVFTIGFVIAFVISALAKKPKKVDLMDTYTGGEFIY HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEE TAELYHFSYKMYRSFDRMFERWPLMEKWLENTSYKLRELGAFFRSLFYPSSPQGYVTLSI EEHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHH LAILTAYWWLR HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; H+; ubiquinone
Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11356194 [H]