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The map label for this gene is ybbC [H]

Identifier: 239618352

GI number: 239618352

Start: 2112542

End: 2113660

Strand: Reverse

Name: ybbC [H]

Synonym: Kole_1990

Alternate gene names: 239618352

Gene position: 2113660-2112542 (Counterclockwise)

Preceding gene: 239618363

Following gene: 239618351

Centisome position: 91.81

GC content: 38.78

Gene sequence:

>1119_bases
ATGATCCTTCAGGGTATTGATGTATTAGAGAAGAACGAATTTAGGCCTTTAAGAAGAAGGAAGGTTGGACTGATCACTAA
TTATTCCTTTGTTACCAAAGATATGCGTCAGGGACTGGATGTTTTAATCCAAAATAACATAAATGTGGTTAAGATATTCA
CGCCGGAACATGGATTATATGGGCTTCCTGACGGTGAAACGTTCAATGATACACTTCATCCTAAATACAAAATCCCGGTT
ATAAGTCTTTATGGAAAGAAGAAAAAACCTGAGTCCAATGATCTGGAAGACATCGATATACTTGTTTATGACATACAGGA
TGTTGGACTCAGATATTATACGTTTATCTATACCCTAGCATATACGCTGGAAGCAGCAAGCGAAAATGGTATTGATTATC
TTGTTCTTGACAGGATAAATCCACTGGGGAGAAAAGTCTATGGTCCAAGAATCCCCGACAAACTTTCCAGTTTCGTCGGT
GATTATTTACTCCCAACGAGGTATGGTTTAACTCCAGGAGAACTTGCACAATACTTTTTAAGGCTGAAAAAACTCGATCT
TGAATTAAAAGTAATACCTCTTGAAGGTTGGGGCGGTGAAGGGTTTAATCAAACCGATTTATTATGGAATGTACCATCTC
CTGCCCTTCCAACATACGAGGCTACCTTATGTTATGCCGGAATTTGCTTTCTTGAAGCAACAAACGTTAGCGAAGGGCGA
GGAACACCAAAACCTTTTCAGTATATCGGAGCCCCCTGGGTTGATAACGACGAACTGTATGAATTTCTCAAGGATATGTT
CCCGAATCTTATCCTAAGAAAGCGTGAGTTCATCCCGAGATTTGGTAAGTACGCCCAACAATTGTGTTTTGGCGTTGAGT
TTTTCCCAAAATTTGAAGATAATTTCTTTGAAGTTTCGATTTCACTTTTACACTACCTCTCAAAATACCCTGAAATGAAA
ATCGATAAGCATATCTCACGATTAATGGGAGACGAATTGGCATTAGAAATAGCTACGGGAAAAACTGATGTCAACGTCTG
GCGTAAATCAGCTGAAGAGTTTATAGATACCGTTTCCGATCTATTGATATACGGAGGGAATTTATATTATGACTCTTGA

Upstream 100 bases:

>100_bases
AGGAATAAAATCAAAACTATATTGGTTATATTGTAATTACATTATGGCAAAATAAGTATAGCTAGATAAAGAACGATAAA
AACTAAAAGGAGAATTGCTC

Downstream 100 bases:

>100_bases
AGAAAAAGTAGGCAAACTATTTATGATTGGACTCCCGGGTAAAAGTATGGACGCTGAAACGGTGAAAATACTCGAAAGAG
TGAACCCAGGCTCGATTATC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MILQGIDVLEKNEFRPLRRRKVGLITNYSFVTKDMRQGLDVLIQNNINVVKIFTPEHGLYGLPDGETFNDTLHPKYKIPV
ISLYGKKKKPESNDLEDIDILVYDIQDVGLRYYTFIYTLAYTLEAASENGIDYLVLDRINPLGRKVYGPRIPDKLSSFVG
DYLLPTRYGLTPGELAQYFLRLKKLDLELKVIPLEGWGGEGFNQTDLLWNVPSPALPTYEATLCYAGICFLEATNVSEGR
GTPKPFQYIGAPWVDNDELYEFLKDMFPNLILRKREFIPRFGKYAQQLCFGVEFFPKFEDNFFEVSISLLHYLSKYPEMK
IDKHISRLMGDELALEIATGKTDVNVWRKSAEEFIDTVSDLLIYGGNLYYDS

Sequences:

>Translated_372_residues
MILQGIDVLEKNEFRPLRRRKVGLITNYSFVTKDMRQGLDVLIQNNINVVKIFTPEHGLYGLPDGETFNDTLHPKYKIPV
ISLYGKKKKPESNDLEDIDILVYDIQDVGLRYYTFIYTLAYTLEAASENGIDYLVLDRINPLGRKVYGPRIPDKLSSFVG
DYLLPTRYGLTPGELAQYFLRLKKLDLELKVIPLEGWGGEGFNQTDLLWNVPSPALPTYEATLCYAGICFLEATNVSEGR
GTPKPFQYIGAPWVDNDELYEFLKDMFPNLILRKREFIPRFGKYAQQLCFGVEFFPKFEDNFFEVSISLLHYLSKYPEMK
IDKHISRLMGDELALEIATGKTDVNVWRKSAEEFIDTVSDLLIYGGNLYYDS
>Mature_372_residues
MILQGIDVLEKNEFRPLRRRKVGLITNYSFVTKDMRQGLDVLIQNNINVVKIFTPEHGLYGLPDGETFNDTLHPKYKIPV
ISLYGKKKKPESNDLEDIDILVYDIQDVGLRYYTFIYTLAYTLEAASENGIDYLVLDRINPLGRKVYGPRIPDKLSSFVG
DYLLPTRYGLTPGELAQYFLRLKKLDLELKVIPLEGWGGEGFNQTDLLWNVPSPALPTYEATLCYAGICFLEATNVSEGR
GTPKPFQYIGAPWVDNDELYEFLKDMFPNLILRKREFIPRFGKYAQQLCFGVEFFPKFEDNFFEVSISLLHYLSKYPEMK
IDKHISRLMGDELALEIATGKTDVNVWRKSAEEFIDTVSDLLIYGGNLYYDS

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 42826; Mature: 42826

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILQGIDVLEKNEFRPLRRRKVGLITNYSFVTKDMRQGLDVLIQNNINVVKIFTPEHGLY
CCCCCCCHHHCCCCCHHHHHHCCEEECHHHHHHHHHCCHHEEEECCCCEEEEECCCCCCC
GLPDGETFNDTLHPKYKIPVISLYGKKKKPESNDLEDIDILVYDIQDVGLRYYTFIYTLA
CCCCCCCCCCCCCCCEECEEEEECCCCCCCCCCCCCCEEEEEEEHHHHCHHHHHHHHHHH
YTLEAASENGIDYLVLDRINPLGRKVYGPRIPDKLSSFVGDYLLPTRYGLTPGELAQYFL
HHHHHCCCCCCEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
RLKKLDLELKVIPLEGWGGEGFNQTDLLWNVPSPALPTYEATLCYAGICFLEATNVSEGR
HHHHCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHEEEEEECCCCCCC
GTPKPFQYIGAPWVDNDELYEFLKDMFPNLILRKREFIPRFGKYAQQLCFGVEFFPKFED
CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC
NFFEVSISLLHYLSKYPEMKIDKHISRLMGDELALEIATGKTDVNVWRKSAEEFIDTVSD
CHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
LLIYGGNLYYDS
HHHCCCEEEECC
>Mature Secondary Structure
MILQGIDVLEKNEFRPLRRRKVGLITNYSFVTKDMRQGLDVLIQNNINVVKIFTPEHGLY
CCCCCCCHHHCCCCCHHHHHHCCEEECHHHHHHHHHCCHHEEEECCCCEEEEECCCCCCC
GLPDGETFNDTLHPKYKIPVISLYGKKKKPESNDLEDIDILVYDIQDVGLRYYTFIYTLA
CCCCCCCCCCCCCCCEECEEEEECCCCCCCCCCCCCCEEEEEEEHHHHCHHHHHHHHHHH
YTLEAASENGIDYLVLDRINPLGRKVYGPRIPDKLSSFVGDYLLPTRYGLTPGELAQYFL
HHHHHCCCCCCEEEEEECCCHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
RLKKLDLELKVIPLEGWGGEGFNQTDLLWNVPSPALPTYEATLCYAGICFLEATNVSEGR
HHHHCCCEEEEEEEECCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHEEEEEECCCCCCC
GTPKPFQYIGAPWVDNDELYEFLKDMFPNLILRKREFIPRFGKYAQQLCFGVEFFPKFED
CCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCC
NFFEVSISLLHYLSKYPEMKIDKHISRLMGDELALEIATGKTDVNVWRKSAEEFIDTVSD
CHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
LLIYGGNLYYDS
HHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]