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The map label for this gene is ycjP [C]

Identifier: 239618363

GI number: 239618363

Start: 2124895

End: 2125713

Strand: Reverse

Name: ycjP [C]

Synonym: Kole_2001

Alternate gene names: 239618363

Gene position: 2125713-2124895 (Counterclockwise)

Preceding gene: 239618364

Following gene: 239618352

Centisome position: 92.34

GC content: 38.22

Gene sequence:

>819_bases
ATGAAAAAAATAAATGCGACCTTAACATATATTCTTTTACTCATCTTCGCAGCTTTTTTCTTAATGCCAATATATGTTCT
ATTCTCAACCAGTTTTAAGTCACTGACAGAAGTGAGTCTGGAAAGACTGTGGTTCCTTCCTACCAAACCTTCTCTTTACG
GTTTTATAAAGGCTTTTCAGAAGCTTTCTCCTAATCTAAAGAACAGTTTTATTCTCGTGATACCCGCAACGATAATTTCG
GCTATGGTGGGATCAATAAATGGATACGTACTGTCAAAAATTAAATTCAAAGGATCTGACCTGTTATTTACTTTGATACT
CTTTGGAATGTTTATTCCATATCAAAGTGTTCTATTTCCCCTAATCAGATTCCTTCAAAGGATAAATCTCTATGGTTCCA
TCTGGGGATTGGTCCTGGTACACATCATATATGGTCTTCCAATAACAACGTTGATTTTCAGAAATTATTATGCTGAAGTT
CCTTCAGAACTCATAGAAGCTGCTCACATAGATGGTGCGGGAATTTTCAAAGCATACTGGAAAGTCCTTTTCCCGATTTC
TATACCCGGATTCGTTGTGGTAATTATCTGGCAATTCACCAACATCTGGAACGAATTCTTATTTGCGGTTACGGTTACCA
GCGATCCCACTAAACAACCAATTACAGTTGCCCTGGTAAATCTCGCAGGAAGTAAAGTCGTGGAATGGAATGTTCAAATG
TCAGGGGCACTTTTAGCAGCACTCCCAACTCTTTTGGTGTACACCTTATTAGGTAAATATTTCCTTAGGGGTCTCCTTGC
CGGTTCTGTAAAAGGGTAA

Upstream 100 bases:

>100_bases
GATATGCTACCGGCTCTGCCATCGCCATTATAATGCTTGTAATGGTAGCAGTAGTGATAGTACCGTACCTTATTTCATCC
ATGAAAAGGGAAGTGAGCAG

Downstream 100 bases:

>100_bases
GGAGAAATCATAAAAAACTTCATCCAAAAGCGGATTATCACCGATTCAAAGGATGTTTTTTTGTTTCACCAATGGTGAAA
TAGGGTTGTTGTGTTTCGAT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKKINATLTYILLLIFAAFFLMPIYVLFSTSFKSLTEVSLERLWFLPTKPSLYGFIKAFQKLSPNLKNSFILVIPATIIS
AMVGSINGYVLSKIKFKGSDLLFTLILFGMFIPYQSVLFPLIRFLQRINLYGSIWGLVLVHIIYGLPITTLIFRNYYAEV
PSELIEAAHIDGAGIFKAYWKVLFPISIPGFVVVIIWQFTNIWNEFLFAVTVTSDPTKQPITVALVNLAGSKVVEWNVQM
SGALLAALPTLLVYTLLGKYFLRGLLAGSVKG

Sequences:

>Translated_272_residues
MKKINATLTYILLLIFAAFFLMPIYVLFSTSFKSLTEVSLERLWFLPTKPSLYGFIKAFQKLSPNLKNSFILVIPATIIS
AMVGSINGYVLSKIKFKGSDLLFTLILFGMFIPYQSVLFPLIRFLQRINLYGSIWGLVLVHIIYGLPITTLIFRNYYAEV
PSELIEAAHIDGAGIFKAYWKVLFPISIPGFVVVIIWQFTNIWNEFLFAVTVTSDPTKQPITVALVNLAGSKVVEWNVQM
SGALLAALPTLLVYTLLGKYFLRGLLAGSVKG
>Mature_272_residues
MKKINATLTYILLLIFAAFFLMPIYVLFSTSFKSLTEVSLERLWFLPTKPSLYGFIKAFQKLSPNLKNSFILVIPATIIS
AMVGSINGYVLSKIKFKGSDLLFTLILFGMFIPYQSVLFPLIRFLQRINLYGSIWGLVLVHIIYGLPITTLIFRNYYAEV
PSELIEAAHIDGAGIFKAYWKVLFPISIPGFVVVIIWQFTNIWNEFLFAVTVTSDPTKQPITVALVNLAGSKVVEWNVQM
SGALLAALPTLLVYTLLGKYFLRGLLAGSVKG

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=271, Percent_Identity=25.0922509225092, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789860, Length=207, Percent_Identity=25.6038647342995, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1790464, Length=191, Percent_Identity=28.2722513089005, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30496; Mature: 30496

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKINATLTYILLLIFAAFFLMPIYVLFSTSFKSLTEVSLERLWFLPTKPSLYGFIKAFQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KLSPNLKNSFILVIPATIISAMVGSINGYVLSKIKFKGSDLLFTLILFGMFIPYQSVLFP
HHCCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LIRFLQRINLYGSIWGLVLVHIIYGLPITTLIFRNYYAEVPSELIEAAHIDGAGIFKAYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KVLFPISIPGFVVVIIWQFTNIWNEFLFAVTVTSDPTKQPITVALVNLAGSKVVEWNVQM
HHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHEEEECCCCEEEEEECHH
SGALLAALPTLLVYTLLGKYFLRGLLAGSVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKINATLTYILLLIFAAFFLMPIYVLFSTSFKSLTEVSLERLWFLPTKPSLYGFIKAFQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KLSPNLKNSFILVIPATIISAMVGSINGYVLSKIKFKGSDLLFTLILFGMFIPYQSVLFP
HHCCCCCCCEEEEEHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
LIRFLQRINLYGSIWGLVLVHIIYGLPITTLIFRNYYAEVPSELIEAAHIDGAGIFKAYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KVLFPISIPGFVVVIIWQFTNIWNEFLFAVTVTSDPTKQPITVALVNLAGSKVVEWNVQM
HHHHCCCCCHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCHHHEEEECCCCEEEEEECHH
SGALLAALPTLLVYTLLGKYFLRGLLAGSVKG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]