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The map label for this gene is 239617938

Identifier: 239617938

GI number: 239617938

Start: 1677097

End: 1678629

Strand: Direct

Name: 239617938

Synonym: Kole_1566

Alternate gene names: NA

Gene position: 1677097-1678629 (Clockwise)

Preceding gene: 239617937

Following gene: 239617939

Centisome position: 72.85

GC content: 43.9

Gene sequence:

>1533_bases
ATGACAATAATTTGGTCTTTAATAGGTTCAATCATAGGAATAGTAATTTCTGCTTTGATTTTTATTCCCATTGTTTCCAG
AAAGGTTCGGAAGAAGCTTGAGGAAGAGTTGAAACTGGCAAAACAGGATGCGGAATCTATAAAGAAGAGGGCTCTGGAGG
AAGCAGAACATCTTAAGAAAAAAGCCATTATTGAGGGACGTGAAGAACTTCATAAGCAACGCGACGAAATGGAAAGGGAA
CTGCGTCGTGAACGTGAAGAACTCAAACAGTGGGAAGAAAGAATTTCCAGACGGGAAGATAACCTTGATAGGAAAGAGGA
AAATCTTGAAAAACTGAGGGTAGAGCTGGAAAAGGAGCGCAATGAGATAGAAAAGCTTCGGCAGGAAGCAGAAAACAAGC
TTTATCAGCTTGCTGAGCTGTCTCCAGAAGAGGCGAGAGAGATCGTCTTTAAGCGCGTTGAAGAAAGGTATGAATACGAT
ATAGCCCAGAGATACAAACAGATAAAGGAACAGTATGAAGAAGATGCGGCTAAACATGCAAAATGGGTGGTTGTTACCAC
AATACAAAGATATGCTGCCGACTACACAAGTGAGATTACCGTTAGTACGGTAAGTCTTCCTTCGGATGAAATGAAGGGAA
GAATAATAGGAAGGGAAGGCAGGAACATCCGTGCCTTCGAAAAATTAACAGGGGCAGATCTGATCATAGATGATACCCCT
GAAGTGGTTGTAATCTCGTGTTTCAATCCTTTGCGGCGAGCAATTGCGAAATTGACACTGGAAAAGCTTGTGGAGGATGG
AAGAATTCATCCAGCAAGAATAGAAGAGATGTATGAAAAAGCGAAACGCGAAATATACGCTGAAATCAAAGAAGCCGGTC
AGGAAGCACTCATGAAGGTTGGGATACCTTCGATGCACCCGGAACTGGTAAAACTTCTCGGGCGCTTGAAGTACAGAACC
AGTTATGGTCAGAACGTTTTGCAGCACTCCATAGAAGTGGCACAGATCGCTGCACTTATGGCGGCAGAGCTGGGGCTCAA
TGTTGAAAAGATCAAACGGGGTGCTTTGCTTCACGATATTGGAAAGGCTGTTGATCATGAGATAGAAGGTTCTCACGCCA
TCATAGGCGGAGAAATAGTAAAGCGTTACGGTGAGAAATCCGATGTTGTTAATATGATACAGTATCACCATGGTGAGACG
GAGGCCCTAACACCGGAAGCTGTTCTTGTAGCAGCAGCCGATGCTGTGTCTGCGGCTCGTCCTGGAGCCAGAAGAGAGTC
TCTTGACATGTACATAAAACGACTCGAGAATCTTGAGAACATTGCAAAAGGGTTCGCAAACATCGAGAAGGCTTACGCTA
TTCAGGCTGGAAGAGAAATAAGAGTGATAGTGGAACCGGAAAAAGTTGATGATGTGATGGCAGAAAAACTTGCCGGAGAT
ATTGCAAAACGGATAGAAGAAGAAATGGAGTATCCAGGTGTTATAAAAGTGACAGTCATTAGAGAGAGAAGGAGCGTGGC
TTACGCCAGTTAA

Upstream 100 bases:

>100_bases
ACCTCGAAGAAAGTCACTGATTCTGTAGTTTTTTGAAACCATGATACAAGAAAGGAGGGAGCTGGATATATCCAGATTCG
GATAAGTACCAGCGTAGATC

Downstream 100 bases:

>100_bases
GTTGCAATTGACACCCATAATTTTGTGCGGTAAAATTGTGCCGAGTGCCAACGTAGCTCAACCGGCAGAGCGGCTCATTC
GTAATGAGCAGGTTGTGGGT

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 510; Mature: 509

Protein sequence:

>510_residues
MTIIWSLIGSIIGIVISALIFIPIVSRKVRKKLEEELKLAKQDAESIKKRALEEAEHLKKKAIIEGREELHKQRDEMERE
LRREREELKQWEERISRREDNLDRKEENLEKLRVELEKERNEIEKLRQEAENKLYQLAELSPEEAREIVFKRVEERYEYD
IAQRYKQIKEQYEEDAAKHAKWVVVTTIQRYAADYTSEITVSTVSLPSDEMKGRIIGREGRNIRAFEKLTGADLIIDDTP
EVVVISCFNPLRRAIAKLTLEKLVEDGRIHPARIEEMYEKAKREIYAEIKEAGQEALMKVGIPSMHPELVKLLGRLKYRT
SYGQNVLQHSIEVAQIAALMAAELGLNVEKIKRGALLHDIGKAVDHEIEGSHAIIGGEIVKRYGEKSDVVNMIQYHHGET
EALTPEAVLVAAADAVSAARPGARRESLDMYIKRLENLENIAKGFANIEKAYAIQAGREIRVIVEPEKVDDVMAEKLAGD
IAKRIEEEMEYPGVIKVTVIRERRSVAYAS

Sequences:

>Translated_510_residues
MTIIWSLIGSIIGIVISALIFIPIVSRKVRKKLEEELKLAKQDAESIKKRALEEAEHLKKKAIIEGREELHKQRDEMERE
LRREREELKQWEERISRREDNLDRKEENLEKLRVELEKERNEIEKLRQEAENKLYQLAELSPEEAREIVFKRVEERYEYD
IAQRYKQIKEQYEEDAAKHAKWVVVTTIQRYAADYTSEITVSTVSLPSDEMKGRIIGREGRNIRAFEKLTGADLIIDDTP
EVVVISCFNPLRRAIAKLTLEKLVEDGRIHPARIEEMYEKAKREIYAEIKEAGQEALMKVGIPSMHPELVKLLGRLKYRT
SYGQNVLQHSIEVAQIAALMAAELGLNVEKIKRGALLHDIGKAVDHEIEGSHAIIGGEIVKRYGEKSDVVNMIQYHHGET
EALTPEAVLVAAADAVSAARPGARRESLDMYIKRLENLENIAKGFANIEKAYAIQAGREIRVIVEPEKVDDVMAEKLAGD
IAKRIEEEMEYPGVIKVTVIRERRSVAYAS
>Mature_509_residues
TIIWSLIGSIIGIVISALIFIPIVSRKVRKKLEEELKLAKQDAESIKKRALEEAEHLKKKAIIEGREELHKQRDEMEREL
RREREELKQWEERISRREDNLDRKEENLEKLRVELEKERNEIEKLRQEAENKLYQLAELSPEEAREIVFKRVEERYEYDI
AQRYKQIKEQYEEDAAKHAKWVVVTTIQRYAADYTSEITVSTVSLPSDEMKGRIIGREGRNIRAFEKLTGADLIIDDTPE
VVVISCFNPLRRAIAKLTLEKLVEDGRIHPARIEEMYEKAKREIYAEIKEAGQEALMKVGIPSMHPELVKLLGRLKYRTS
YGQNVLQHSIEVAQIAALMAAELGLNVEKIKRGALLHDIGKAVDHEIEGSHAIIGGEIVKRYGEKSDVVNMIQYHHGETE
ALTPEAVLVAAADAVSAARPGARRESLDMYIKRLENLENIAKGFANIEKAYAIQAGREIRVIVEPEKVDDVMAEKLAGDI
AKRIEEEMEYPGVIKVTVIRERRSVAYAS

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA [H]

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017705
- InterPro:   IPR022711
- InterPro:   IPR004087
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: PF12072 DUF3552; PF00013 KH_1 [H]

EC number: =3.1.4.16 [H]

Molecular weight: Translated: 58542; Mature: 58411

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIIWSLIGSIIGIVISALIFIPIVSRKVRKKLEEELKLAKQDAESIKKRALEEAEHLKK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAIIEGREELHKQRDEMERELRREREELKQWEERISRREDNLDRKEENLEKLRVELEKER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
NEIEKLRQEAENKLYQLAELSPEEAREIVFKRVEERYEYDIAQRYKQIKEQYEEDAAKHA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KWVVVTTIQRYAADYTSEITVSTVSLPSDEMKGRIIGREGRNIRAFEKLTGADLIIDDTP
CCHHHHHHHHHHHHCCCCEEEEEEECCCHHHCCCEECCCCCCCHHHHHHCCCCEEECCCC
EVVVISCFNPLRRAIAKLTLEKLVEDGRIHPARIEEMYEKAKREIYAEIKEAGQEALMKV
CEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIPSMHPELVKLLGRLKYRTSYGQNVLQHSIEVAQIAALMAAELGLNVEKIKRGALLHDI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GKAVDHEIEGSHAIIGGEIVKRYGEKSDVVNMIQYHHGETEALTPEAVLVAAADAVSAAR
HHHHCCCCCCCCEEECHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
PGARRESLDMYIKRLENLENIAKGFANIEKAYAIQAGREIRVIVEPEKVDDVMAEKLAGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH
IAKRIEEEMEYPGVIKVTVIRERRSVAYAS
HHHHHHHHCCCCCEEEEEEEHHHHHHCCCC
>Mature Secondary Structure 
TIIWSLIGSIIGIVISALIFIPIVSRKVRKKLEEELKLAKQDAESIKKRALEEAEHLKK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAIIEGREELHKQRDEMERELRREREELKQWEERISRREDNLDRKEENLEKLRVELEKER
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
NEIEKLRQEAENKLYQLAELSPEEAREIVFKRVEERYEYDIAQRYKQIKEQYEEDAAKHA
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KWVVVTTIQRYAADYTSEITVSTVSLPSDEMKGRIIGREGRNIRAFEKLTGADLIIDDTP
CCHHHHHHHHHHHHCCCCEEEEEEECCCHHHCCCEECCCCCCCHHHHHHCCCCEEECCCC
EVVVISCFNPLRRAIAKLTLEKLVEDGRIHPARIEEMYEKAKREIYAEIKEAGQEALMKV
CEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIPSMHPELVKLLGRLKYRTSYGQNVLQHSIEVAQIAALMAAELGLNVEKIKRGALLHDI
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
GKAVDHEIEGSHAIIGGEIVKRYGEKSDVVNMIQYHHGETEALTPEAVLVAAADAVSAAR
HHHHCCCCCCCCEEECHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
PGARRESLDMYIKRLENLENIAKGFANIEKAYAIQAGREIRVIVEPEKVDDVMAEKLAGD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH
IAKRIEEEMEYPGVIKVTVIRERRSVAYAS
HHHHHHHHCCCCCEEEEEEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA