| Definition | Kosmotoga olearia TBF 19.5.1, complete genome. |
|---|---|
| Accession | NC_012785 |
| Length | 2,302,126 |
Click here to switch to the map view.
The map label for this gene is recX [H]
Identifier: 239617937
GI number: 239617937
Start: 1676567
End: 1677016
Strand: Direct
Name: recX [H]
Synonym: Kole_1565
Alternate gene names: 239617937
Gene position: 1676567-1677016 (Clockwise)
Preceding gene: 239617936
Following gene: 239617938
Centisome position: 72.83
GC content: 37.78
Gene sequence:
>450_bases ATGGCTCGTAAGGAAGCACTCAGATACTTGCGTTACAGAGCACGTTCCGAAAAAGAGATGAAAGCTTATCTCGGGAAAAG AGGATATGATTCTCAAGTCATAGAAAAGGTGCTTGCGGAGCTTAAAAGACAGAATTTCATCAATGATGAACAATTTTGTA GACTCTACGTTTATGATGCATTCAGGGTTTATCACAAAGGACCTTTTCGAATCCGTCAGGAATTGAGACAGCTAGGTATA AGCATTGGAACGATAGAAAAGGAAATTGAAAGTTTTTTGGCCGAGAACGATCTGAAGGAAATTGTAAAGGATTATTTGAA CAGACATCTCGGGAATGAGCCACTATCGATAAAAAAATTGGAGAAACTAAAAGCAAGACTATATCGAAAAGGATTTGATC CGTTTTTCCTAAATGAGGTTTTAAGAGAATACCTCGAAGAAAGTCACTGA
Upstream 100 bases:
>100_bases AGAATTCGTGAAAAGTATAGTTTACCGAAAGTAGAGGAAAAATCAGAAAAAGTGAAAGAAAATGGTGAAAAAGAATAACA ATAATGCTGAGATTGTTTCC
Downstream 100 bases:
>100_bases TTCTGTAGTTTTTTGAAACCATGATACAAGAAAGGAGGGAGCTGGATATATCCAGATTCGGATAAGTACCAGCGTAGATC ATGACAATAATTTGGTCTTT
Product: regulatory protein RecX
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MARKEALRYLRYRARSEKEMKAYLGKRGYDSQVIEKVLAELKRQNFINDEQFCRLYVYDAFRVYHKGPFRIRQELRQLGI SIGTIEKEIESFLAENDLKEIVKDYLNRHLGNEPLSIKKLEKLKARLYRKGFDPFFLNEVLREYLEESH
Sequences:
>Translated_149_residues MARKEALRYLRYRARSEKEMKAYLGKRGYDSQVIEKVLAELKRQNFINDEQFCRLYVYDAFRVYHKGPFRIRQELRQLGI SIGTIEKEIESFLAENDLKEIVKDYLNRHLGNEPLSIKKLEKLKARLYRKGFDPFFLNEVLREYLEESH >Mature_148_residues ARKEALRYLRYRARSEKEMKAYLGKRGYDSQVIEKVLAELKRQNFINDEQFCRLYVYDAFRVYHKGPFRIRQELRQLGIS IGTIEKEIESFLAENDLKEIVKDYLNRHLGNEPLSIKKLEKLKARLYRKGFDPFFLNEVLREYLEESH
Specific function: Modulates recA activity [H]
COG id: COG2137
COG function: function code R; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the recX family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003783 [H]
Pfam domain/function: PF02631 RecX [H]
EC number: NA
Molecular weight: Translated: 18012; Mature: 17881
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKEALRYLRYRARSEKEMKAYLGKRGYDSQVIEKVLAELKRQNFINDEQFCRLYVYDA CCHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FRVYHKGPFRIRQELRQLGISIGTIEKEIESFLAENDLKEIVKDYLNRHLGNEPLSIKKL HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH EKLKARLYRKGFDPFFLNEVLREYLEESH HHHHHHHHHCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure ARKEALRYLRYRARSEKEMKAYLGKRGYDSQVIEKVLAELKRQNFINDEQFCRLYVYDA CHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH FRVYHKGPFRIRQELRQLGISIGTIEKEIESFLAENDLKEIVKDYLNRHLGNEPLSIKKL HHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH EKLKARLYRKGFDPFFLNEVLREYLEESH HHHHHHHHHCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]