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The map label for this gene is sufB [C]

Identifier: 239617860

GI number: 239617860

Start: 1587008

End: 1588402

Strand: Direct

Name: sufB [C]

Synonym: Kole_1487

Alternate gene names: 239617860

Gene position: 1587008-1588402 (Clockwise)

Preceding gene: 239617859

Following gene: 239617861

Centisome position: 68.94

GC content: 45.09

Gene sequence:

>1395_bases
ATGAGCGAGAAAATTCATATAGATGATTCGCGATTTAATTTTCGAACTGATACGAGTTATCAATATAAGAGCGCCCCGGG
TTTGAACAAAGAAATTATTCGTGATATTTCCCGACATAAAGATGAGCCACACTGGATGTTAGAGAAACGTCTCGAATCGT
TGAGAATATTCGAGGAACTTCACGATCCAAATTTCGGTGTCGATACCAGTTCTCTCGATATCGGGGAAATAATTCCCTAT
TTGAAACCTGATGCTGGAAAAGAGACCTCATGGGAAGAGGTGCCTGATGAAATAAAAGAGACCTTCGAAAAGCTTGGTAT
TCCTCAGGCCGAAAGGAAAGCCCTTGCTGGAGTTGGAGCCCAGTATGATTCTGAGGTCGTGTATCAGCATATAAAGAATG
AACTCGAGGAAATCGGTGTCATCTTTCTTGATATGGAAACGGCGGTAAAAAAATATCCTGAGCTGGTGAAAAAGTATTTC
ATGAGGCTGGTCCCGGCGACAGACCATAAATATGCGGCTTTACACGGAGCTATCTGGAGCGGTGGCTCTTTTGTTTATGT
TCCGGAAAATGTCAGAGTTCCGCTCCCTCTACAGGCGTATTTCAGAATGAATATGGCGGGGACCGGGCAGTTTGAGCACA
CGCTCATAATCGCTGACAGGGGAAGCGAGTTACACTTCATTGAAGGATGTTCAGCGCCGCGATACAATGTTCATAATCTT
CACGCAGGAATGGTGGAGATATATGTTATGGAGGGTGCCAAGGTCAGATACTCAACAATACAGAACTGGTCGAAAAACAC
CTACAACCTCAATACAAAGCGGGCTCTCGTTGAAAAAGATGGCGTGATGGAATGGGTATCCGGTTCTATGGGAAGTATGA
AGACCATGCTTTATCCGACGACGATACTTAATGGTGAAGGTGCCAGAGCCCAGCATCTTGCTATAACATATGCCGGACCC
GGCCAACATATGGATACGGGCTCCAAGGTTGTTCACCTTGCCCCCAATACCAGTTCAACTGTTGATGCGAGAAGTATAAG
TATCGGAGGAGGCTGGGCTTTCTATCGAGGACTCTTATATGTTTCGGAGAATGCGGAAAGTACCAAAGCCTCCGTACAGT
GTACAGCTCTTATGATGGACAATGATTCAAAATCAGATACTGTTCCTATAATAGATGTAAGGACGGATAAGGCCGATATC
GGTCACGAGGCACGGATTGGAAGAATCAGTGAAGATCAGATTTATTACCTGATGACAAGGGGACTTTCTGAGGCCGAAGC
GAGAGCCATGATCGTTCGAGGGTTTATGGAACCGATTACGAGAGAGCTGCCCATTGAATACGCTGTTGAATTGAATCGGC
TCATAAATCTTGAAATTGAGAGCAGCATAGGTTAG

Upstream 100 bases:

>100_bases
GTGGATGGGCGGGTTATTATTAGTGACGGTGCGGAACTTGCCAGAAAAGTGGAAGAAAAGGGATATGGTTTTCTAACGGA
AAGGGTTTAGAGGTGGTAGT

Downstream 100 bases:

>100_bases
GAGTGGTGTGCAGTGGAAAAGACATTGAACCTCGTCCATAATGAGTTCAAAATGGTCGAACCTGTAATAGAAAGGAAAAG
CTTACCAGATTATGACTTGA

Product: FeS assembly protein SufB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MSEKIHIDDSRFNFRTDTSYQYKSAPGLNKEIIRDISRHKDEPHWMLEKRLESLRIFEELHDPNFGVDTSSLDIGEIIPY
LKPDAGKETSWEEVPDEIKETFEKLGIPQAERKALAGVGAQYDSEVVYQHIKNELEEIGVIFLDMETAVKKYPELVKKYF
MRLVPATDHKYAALHGAIWSGGSFVYVPENVRVPLPLQAYFRMNMAGTGQFEHTLIIADRGSELHFIEGCSAPRYNVHNL
HAGMVEIYVMEGAKVRYSTIQNWSKNTYNLNTKRALVEKDGVMEWVSGSMGSMKTMLYPTTILNGEGARAQHLAITYAGP
GQHMDTGSKVVHLAPNTSSTVDARSISIGGGWAFYRGLLYVSENAESTKASVQCTALMMDNDSKSDTVPIIDVRTDKADI
GHEARIGRISEDQIYYLMTRGLSEAEARAMIVRGFMEPITRELPIEYAVELNRLINLEIESSIG

Sequences:

>Translated_464_residues
MSEKIHIDDSRFNFRTDTSYQYKSAPGLNKEIIRDISRHKDEPHWMLEKRLESLRIFEELHDPNFGVDTSSLDIGEIIPY
LKPDAGKETSWEEVPDEIKETFEKLGIPQAERKALAGVGAQYDSEVVYQHIKNELEEIGVIFLDMETAVKKYPELVKKYF
MRLVPATDHKYAALHGAIWSGGSFVYVPENVRVPLPLQAYFRMNMAGTGQFEHTLIIADRGSELHFIEGCSAPRYNVHNL
HAGMVEIYVMEGAKVRYSTIQNWSKNTYNLNTKRALVEKDGVMEWVSGSMGSMKTMLYPTTILNGEGARAQHLAITYAGP
GQHMDTGSKVVHLAPNTSSTVDARSISIGGGWAFYRGLLYVSENAESTKASVQCTALMMDNDSKSDTVPIIDVRTDKADI
GHEARIGRISEDQIYYLMTRGLSEAEARAMIVRGFMEPITRELPIEYAVELNRLINLEIESSIG
>Mature_463_residues
SEKIHIDDSRFNFRTDTSYQYKSAPGLNKEIIRDISRHKDEPHWMLEKRLESLRIFEELHDPNFGVDTSSLDIGEIIPYL
KPDAGKETSWEEVPDEIKETFEKLGIPQAERKALAGVGAQYDSEVVYQHIKNELEEIGVIFLDMETAVKKYPELVKKYFM
RLVPATDHKYAALHGAIWSGGSFVYVPENVRVPLPLQAYFRMNMAGTGQFEHTLIIADRGSELHFIEGCSAPRYNVHNLH
AGMVEIYVMEGAKVRYSTIQNWSKNTYNLNTKRALVEKDGVMEWVSGSMGSMKTMLYPTTILNGEGARAQHLAITYAGPG
QHMDTGSKVVHLAPNTSSTVDARSISIGGGWAFYRGLLYVSENAESTKASVQCTALMMDNDSKSDTVPIIDVRTDKADIG
HEARIGRISEDQIYYLMTRGLSEAEARAMIVRGFMEPITRELPIEYAVELNRLINLEIESSIG

Specific function: Unknown

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI87081955, Length=462, Percent_Identity=37.4458874458874, Blast_Score=329, Evalue=3e-91,
Organism=Escherichia coli, GI1787971, Length=144, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 52257; Mature: 52126

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKIHIDDSRFNFRTDTSYQYKSAPGLNKEIIRDISRHKDEPHWMLEKRLESLRIFEEL
CCCEEEECCCCCEEECCCCEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
HDPNFGVDTSSLDIGEIIPYLKPDAGKETSWEEVPDEIKETFEKLGIPQAERKALAGVGA
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHHHHHHHCCC
QYDSEVVYQHIKNELEEIGVIFLDMETAVKKYPELVKKYFMRLVPATDHKYAALHGAIWS
CCCHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEEEC
GGSFVYVPENVRVPLPLQAYFRMNMAGTGQFEHTLIIADRGSELHFIEGCSAPRYNVHNL
CCEEEEECCCCCCCCCHHHHEEECCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCEE
HAGMVEIYVMEGAKVRYSTIQNWSKNTYNLNTKRALVEKDGVMEWVSGSMGSMKTMLYPT
CCCEEEEEEECCCEEEEHHHHCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCEEEEEEE
TILNGEGARAQHLAITYAGPGQHMDTGSKVVHLAPNTSSTVDARSISIGGGWAFYRGLLY
EEECCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCHHHHEEEEE
VSENAESTKASVQCTALMMDNDSKSDTVPIIDVRTDKADIGHEARIGRISEDQIYYLMTR
EECCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEC
GLSEAEARAMIVRGFMEPITRELPIEYAVELNRLINLEIESSIG
CCCHHHHHHHHHHHHHHHHHHHCCHHHHEEEEHEEEEEEECCCC
>Mature Secondary Structure 
SEKIHIDDSRFNFRTDTSYQYKSAPGLNKEIIRDISRHKDEPHWMLEKRLESLRIFEEL
CCEEEECCCCCEEECCCCEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
HDPNFGVDTSSLDIGEIIPYLKPDAGKETSWEEVPDEIKETFEKLGIPQAERKALAGVGA
CCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCCHHHHHHHHHCCC
QYDSEVVYQHIKNELEEIGVIFLDMETAVKKYPELVKKYFMRLVPATDHKYAALHGAIWS
CCCHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECEEEC
GGSFVYVPENVRVPLPLQAYFRMNMAGTGQFEHTLIIADRGSELHFIEGCSAPRYNVHNL
CCEEEEECCCCCCCCCHHHHEEECCCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCEE
HAGMVEIYVMEGAKVRYSTIQNWSKNTYNLNTKRALVEKDGVMEWVSGSMGSMKTMLYPT
CCCEEEEEEECCCEEEEHHHHCCCCCCCCCCHHHHHHHHCCHHHHHCCCCCCCEEEEEEE
TILNGEGARAQHLAITYAGPGQHMDTGSKVVHLAPNTSSTVDARSISIGGGWAFYRGLLY
EEECCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCHHHHEEEEE
VSENAESTKASVQCTALMMDNDSKSDTVPIIDVRTDKADIGHEARIGRISEDQIYYLMTR
EECCCCCCCCEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEEC
GLSEAEARAMIVRGFMEPITRELPIEYAVELNRLINLEIESSIG
CCCHHHHHHHHHHHHHHHHHHHCCHHHHEEEEHEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA