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The map label for this gene is sufC [C]

Identifier: 239617859

GI number: 239617859

Start: 1586254

End: 1586997

Strand: Direct

Name: sufC [C]

Synonym: Kole_1486

Alternate gene names: 239617859

Gene position: 1586254-1586997 (Clockwise)

Preceding gene: 239617857

Following gene: 239617860

Centisome position: 68.9

GC content: 42.07

Gene sequence:

>744_bases
ATGAGTTTACTCGAGATAAGGAATCTTCGTGCTGGTCTTGTTGAAGAAAACAAGGAGATTTTGAAAGGTGTAAATTTGAG
CGTAAAACAGGGAGAAATCCACGCAATAATGGGACCCAACGGCAGCGGGAAATCCACGCTTGCCAATGTAATAATGGGAA
ATCCAAAGTATAAGGTTATAGATGGAGAGATTCTTTTCGAGGGAGAAAGTATTCTGGATCTTCCCGTAGACGAAAGAGCT
AGAAGAGGTATTTTCCTTTCTTTCCAGTACCCACAGGAGATTCCCGGTATCAGAACGAGAAACTTTCTTATTTCTGTTAA
GCAGTTCATGGGTTCTAAAGAACCGATGCTGAGGTTAAGTAGAGAGATTGAACGTTTCTCAGCAGAAGTGGCTCTTGATA
AAGCTTTTCTGGACAGGTACCTGAACGTTGGGTTTTCTGGCGGGGAGAAAAAGAAGAGCGAAATCCTTCAGATGGCTTTT
CTAAAGCCTAAGCTGGCGATCCTGGATGAAATTGATTCAGGGCTTGATGTTGATGCTTTAAAGACAGTGGCAGAAGCGAT
AATGAGGTTTAAAACAGAGGATATGGCAATTATTCTCATAACCCATTATGAAAGGCTTCTTGAATACATAAAGCCCGATG
TTGTGCACGTTTATGTGGATGGGCGGGTTATTATTAGTGACGGTGCGGAACTTGCCAGAAAAGTGGAAGAAAAGGGATAT
GGTTTTCTAACGGAAAGGGTTTAG

Upstream 100 bases:

>100_bases
CAGCGCACAACGTATAACCAACAACGTTTTCACGCGCTAGCGGGCATACCGGATCTCGGTTCTCGAATTCTTGGATCTCG
AAAGTATTGGAGGGATTATG

Downstream 100 bases:

>100_bases
AGGTGGTAGTATGAGCGAGAAAATTCATATAGATGATTCGCGATTTAATTTTCGAACTGATACGAGTTATCAATATAAGA
GCGCCCCGGGTTTGAACAAA

Product: FeS assembly ATPase SufC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MSLLEIRNLRAGLVEENKEILKGVNLSVKQGEIHAIMGPNGSGKSTLANVIMGNPKYKVIDGEILFEGESILDLPVDERA
RRGIFLSFQYPQEIPGIRTRNFLISVKQFMGSKEPMLRLSREIERFSAEVALDKAFLDRYLNVGFSGGEKKKSEILQMAF
LKPKLAILDEIDSGLDVDALKTVAEAIMRFKTEDMAIILITHYERLLEYIKPDVVHVYVDGRVIISDGAELARKVEEKGY
GFLTERV

Sequences:

>Translated_247_residues
MSLLEIRNLRAGLVEENKEILKGVNLSVKQGEIHAIMGPNGSGKSTLANVIMGNPKYKVIDGEILFEGESILDLPVDERA
RRGIFLSFQYPQEIPGIRTRNFLISVKQFMGSKEPMLRLSREIERFSAEVALDKAFLDRYLNVGFSGGEKKKSEILQMAF
LKPKLAILDEIDSGLDVDALKTVAEAIMRFKTEDMAIILITHYERLLEYIKPDVVHVYVDGRVIISDGAELARKVEEKGY
GFLTERV
>Mature_246_residues
SLLEIRNLRAGLVEENKEILKGVNLSVKQGEIHAIMGPNGSGKSTLANVIMGNPKYKVIDGEILFEGESILDLPVDERAR
RGIFLSFQYPQEIPGIRTRNFLISVKQFMGSKEPMLRLSREIERFSAEVALDKAFLDRYLNVGFSGGEKKKSEILQMAFL
KPKLAILDEIDSGLDVDALKTVAEAIMRFKTEDMAIILITHYERLLEYIKPDVVHVYVDGRVIISDGAELARKVEEKGYG
FLTERV

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI42741659, Length=207, Percent_Identity=28.9855072463768, Blast_Score=67, Evalue=2e-11,
Organism=Escherichia coli, GI1787972, Length=250, Percent_Identity=46.4, Blast_Score=223, Evalue=9e-60,
Organism=Escherichia coli, GI1786698, Length=201, Percent_Identity=29.8507462686567, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787029, Length=213, Percent_Identity=28.6384976525822, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789891, Length=223, Percent_Identity=30.0448430493274, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787500, Length=230, Percent_Identity=29.1304347826087, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1789962, Length=219, Percent_Identity=29.2237442922374, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790162, Length=216, Percent_Identity=29.1666666666667, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789864, Length=228, Percent_Identity=27.1929824561404, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI87081709, Length=209, Percent_Identity=24.4019138755981, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI1788506, Length=199, Percent_Identity=28.643216080402, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1786398, Length=222, Percent_Identity=27.4774774774775, Blast_Score=62, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17541710, Length=233, Percent_Identity=32.618025751073, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71996809, Length=214, Percent_Identity=28.5046728971963, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI193211017, Length=214, Percent_Identity=28.0373831775701, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI193211015, Length=214, Percent_Identity=28.0373831775701, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI212646699, Length=231, Percent_Identity=27.7056277056277, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17543740, Length=206, Percent_Identity=29.126213592233, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17565938, Length=236, Percent_Identity=27.9661016949153, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71984940, Length=234, Percent_Identity=26.0683760683761, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17567269, Length=208, Percent_Identity=29.3269230769231, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI19920532, Length=214, Percent_Identity=29.9065420560748, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24580930, Length=214, Percent_Identity=29.9065420560748, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI45552199, Length=206, Percent_Identity=28.6407766990291, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI24581407, Length=206, Percent_Identity=28.6407766990291, Blast_Score=64, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27818; Mature: 27687

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLEIRNLRAGLVEENKEILKGVNLSVKQGEIHAIMGPNGSGKSTLANVIMGNPKYKVI
CCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHCCCCCEEEE
DGEILFEGESILDLPVDERARRGIFLSFQYPQEIPGIRTRNFLISVKQFMGSKEPMLRLS
CCEEEECCCCEEECCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH
REIERFSAEVALDKAFLDRYLNVGFSGGEKKKSEILQMAFLKPKLAILDEIDSGLDVDAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHH
KTVAEAIMRFKTEDMAIILITHYERLLEYIKPDVVHVYVDGRVIISDGAELARKVEEKGY
HHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCEEEEECCHHHHHHHHHCCC
GFLTERV
CEEECCC
>Mature Secondary Structure 
SLLEIRNLRAGLVEENKEILKGVNLSVKQGEIHAIMGPNGSGKSTLANVIMGNPKYKVI
CHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEECCCCCCHHHHHHHHCCCCCEEEE
DGEILFEGESILDLPVDERARRGIFLSFQYPQEIPGIRTRNFLISVKQFMGSKEPMLRLS
CCEEEECCCCEEECCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH
REIERFSAEVALDKAFLDRYLNVGFSGGEKKKSEILQMAFLKPKLAILDEIDSGLDVDAL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHH
KTVAEAIMRFKTEDMAIILITHYERLLEYIKPDVVHVYVDGRVIISDGAELARKVEEKGY
HHHHHHHHHHCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCEEEEECCHHHHHHHHHCCC
GFLTERV
CEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345 [H]