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The map label for this gene is sufD [C]

Identifier: 239617861

GI number: 239617861

Start: 1588415

End: 1589617

Strand: Direct

Name: sufD [C]

Synonym: Kole_1488

Alternate gene names: 239617861

Gene position: 1588415-1589617 (Clockwise)

Preceding gene: 239617860

Following gene: 239617862

Centisome position: 69.0

GC content: 41.4

Gene sequence:

>1203_bases
GTGGAAAAGACATTGAACCTCGTCCATAATGAGTTCAAAATGGTCGAACCTGTAATAGAAAGGAAAAGCTTACCAGATTA
TGACTTGAGCGTGTTTGAGGTTTCGATAAAAAACACGTCGGAGTATGCGGAGGTTTTTAAACGTAAGAGTTTTGATAAAT
ACCGTAAACTTAAATTTCCCGTATGGAAGCGTGCTAAGTTAGATGGGTTTAAGCTTCCGGAGTACCCTGAAATGACCGAG
CTTGAAATAAATGGTCCGAAGATCTGGAAACCTTTTAACCTCATGGGTGCTGAGGATTATGAACTTCTGGAAAAGCTAGA
ATTCCAGGGTTCAGACGAGAAGTTTGTGCTCCTTTCAGATACCTTTTCTTCGTCAGGTGTCATAGTCAGAACAGAACCCG
GAAAATACTACGAGACCCCGCTTGAGGTAAAGCGTTATGGTAAAGCTTCGATAGCTTCCAGCCTTTTTTATGTTTCGAGA
GGTTCTTTTCTGACACTCATAATAAACAATTCTGAAGAAGCGGAATTCGTATCTGAAGCCAGCAGATTTTATATCGAAGA
TAACGCAAACCTGAACATACTTTTCCTTCAGAATGATTCTTTAAGGGGATACAACTTCAGTAATAATTTTTATATTTTGG
GGGAAAACGCAAAACTCAGGATCTACGATGTTTTGCTTGATGGCAATGTATCTGCACCATATCATCTGGTGAAGGTCATC
GGGAAAAGGACAGAGGTCAATATTCTGTCAGCATTTTTTGCTTCCGGGGGTATGGTAATCGATGCGCTGTACACGACGAG
GCTTGTCGCCCCGGAATCCACTGCTAAAATTAAGGGTATAGGTGCTGTTGCCGGTGGATCGAAGGTCGTTTTCAGGGGAA
CGGTTGACATAAAAAAAGGTGCGAAGAATTCTTCGGGTGATGAGCACAGTGATGTTATCATTCTTTCAAAAGAAGCGATA
GTTCAGGCGATTCCCAGTTTGCTCGTTGATGAAAATGAAGTCAATGCATCGCACGCAGCCAGTGTTGGAACCATCGATGC
AGAAAAGATGTATTATTTGATGTCGAGAGGATTACCAGAAGAGGAGGCCCTTAAACTCATAGTTATGGGAAGTTTTAATC
CTGTCTTAGAAAAGATAGCAGATGAATTTGGTAAAGATTATGCAAGGAGGGTTTACGATGTTATCCAGGAACGAATTGAA
TGA

Upstream 100 bases:

>100_bases
GGAACCGATTACGAGAGAGCTGCCCATTGAATACGCTGTTGAATTGAATCGGCTCATAAATCTTGAAATTGAGAGCAGCA
TAGGTTAGGAGTGGTGTGCA

Downstream 100 bases:

>100_bases
TCTTGCGAAAAGCATAAAAAGAGATTTTCCTATATTTGAAATCCATCCGGGGCTTGTATATCTAGATAACGCTGCGACAA
CTCAAAAACCAGCCTCTGTA

Product: SufBD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MEKTLNLVHNEFKMVEPVIERKSLPDYDLSVFEVSIKNTSEYAEVFKRKSFDKYRKLKFPVWKRAKLDGFKLPEYPEMTE
LEINGPKIWKPFNLMGAEDYELLEKLEFQGSDEKFVLLSDTFSSSGVIVRTEPGKYYETPLEVKRYGKASIASSLFYVSR
GSFLTLIINNSEEAEFVSEASRFYIEDNANLNILFLQNDSLRGYNFSNNFYILGENAKLRIYDVLLDGNVSAPYHLVKVI
GKRTEVNILSAFFASGGMVIDALYTTRLVAPESTAKIKGIGAVAGGSKVVFRGTVDIKKGAKNSSGDEHSDVIILSKEAI
VQAIPSLLVDENEVNASHAASVGTIDAEKMYYLMSRGLPEEEALKLIVMGSFNPVLEKIADEFGKDYARRVYDVIQERIE

Sequences:

>Translated_400_residues
MEKTLNLVHNEFKMVEPVIERKSLPDYDLSVFEVSIKNTSEYAEVFKRKSFDKYRKLKFPVWKRAKLDGFKLPEYPEMTE
LEINGPKIWKPFNLMGAEDYELLEKLEFQGSDEKFVLLSDTFSSSGVIVRTEPGKYYETPLEVKRYGKASIASSLFYVSR
GSFLTLIINNSEEAEFVSEASRFYIEDNANLNILFLQNDSLRGYNFSNNFYILGENAKLRIYDVLLDGNVSAPYHLVKVI
GKRTEVNILSAFFASGGMVIDALYTTRLVAPESTAKIKGIGAVAGGSKVVFRGTVDIKKGAKNSSGDEHSDVIILSKEAI
VQAIPSLLVDENEVNASHAASVGTIDAEKMYYLMSRGLPEEEALKLIVMGSFNPVLEKIADEFGKDYARRVYDVIQERIE
>Mature_400_residues
MEKTLNLVHNEFKMVEPVIERKSLPDYDLSVFEVSIKNTSEYAEVFKRKSFDKYRKLKFPVWKRAKLDGFKLPEYPEMTE
LEINGPKIWKPFNLMGAEDYELLEKLEFQGSDEKFVLLSDTFSSSGVIVRTEPGKYYETPLEVKRYGKASIASSLFYVSR
GSFLTLIINNSEEAEFVSEASRFYIEDNANLNILFLQNDSLRGYNFSNNFYILGENAKLRIYDVLLDGNVSAPYHLVKVI
GKRTEVNILSAFFASGGMVIDALYTTRLVAPESTAKIKGIGAVAGGSKVVFRGTVDIKKGAKNSSGDEHSDVIILSKEAI
VQAIPSLLVDENEVNASHAASVGTIDAEKMYYLMSRGLPEEEALKLIVMGSFNPVLEKIADEFGKDYARRVYDVIQERIE

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=205, Percent_Identity=24.8780487804878, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010231
- InterPro:   IPR000825 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 45065; Mature: 45065

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTLNLVHNEFKMVEPVIERKSLPDYDLSVFEVSIKNTSEYAEVFKRKSFDKYRKLKFP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHCCCC
VWKRAKLDGFKLPEYPEMTELEINGPKIWKPFNLMGAEDYELLEKLEFQGSDEKFVLLSD
CHHCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEE
TFSSSGVIVRTEPGKYYETPLEVKRYGKASIASSLFYVSRGSFLTLIINNSEEAEFVSEA
CCCCCCEEEECCCCCCCCCCHHHHHCCCHHHHHHHHEEECCCEEEEEECCCCHHHHHHHH
SRFYIEDNANLNILFLQNDSLRGYNFSNNFYILGENAKLRIYDVLLDGNVSAPYHLVKVI
HEEEEECCCCEEEEEEECCCCCCEECCCCEEEEECCCEEEEEEEEEECCCCCHHHHHHHH
GKRTEVNILSAFFASGGMVIDALYTTRLVAPESTAKIKGIGAVAGGSKVVFRGTVDIKKG
CCCCHHHHHHHHHHCCCEEEEEEHHHEEECCCCCCEEEEEEEECCCCEEEEEEEEECCCC
AKNSSGDEHSDVIILSKEAIVQAIPSLLVDENEVNASHAASVGTIDAEKMYYLMSRGLPE
CCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCH
EEALKLIVMGSFNPVLEKIADEFGKDYARRVYDVIQERIE
HHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEKTLNLVHNEFKMVEPVIERKSLPDYDLSVFEVSIKNTSEYAEVFKRKSFDKYRKLKFP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHCCHHHHHHCCCC
VWKRAKLDGFKLPEYPEMTELEINGPKIWKPFNLMGAEDYELLEKLEFQGSDEKFVLLSD
CHHCCCCCCCCCCCCCCCEEEEECCCEEECCCCCCCCCHHHHHHHHHCCCCCCEEEEEEE
TFSSSGVIVRTEPGKYYETPLEVKRYGKASIASSLFYVSRGSFLTLIINNSEEAEFVSEA
CCCCCCEEEECCCCCCCCCCHHHHHCCCHHHHHHHHEEECCCEEEEEECCCCHHHHHHHH
SRFYIEDNANLNILFLQNDSLRGYNFSNNFYILGENAKLRIYDVLLDGNVSAPYHLVKVI
HEEEEECCCCEEEEEEECCCCCCEECCCCEEEEECCCEEEEEEEEEECCCCCHHHHHHHH
GKRTEVNILSAFFASGGMVIDALYTTRLVAPESTAKIKGIGAVAGGSKVVFRGTVDIKKG
CCCCHHHHHHHHHHCCCEEEEEEHHHEEECCCCCCEEEEEEEECCCCEEEEEEEEECCCC
AKNSSGDEHSDVIILSKEAIVQAIPSLLVDENEVNASHAASVGTIDAEKMYYLMSRGLPE
CCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCHHHHHHHHHCCCCH
EEALKLIVMGSFNPVLEKIADEFGKDYARRVYDVIQERIE
HHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA