Click here to switch to the map view.

The map label for this gene is trkA [H]

Identifier: 239616780

GI number: 239616780

Start: 390838

End: 391290

Strand: Direct

Name: trkA [H]

Synonym: Kole_0373

Alternate gene names: 239616780

Gene position: 390838-391290 (Clockwise)

Preceding gene: 239616779

Following gene: 239616781

Centisome position: 16.98

GC content: 41.06

Gene sequence:

>453_bases
ATGCCAATTGTCAAAGGTGCATTGAAAAAGAAAGGGTACTTCGTTGTTATCTTCGGTTGTGGAAGATTGGGATCGAGAAT
TGCCAACTGGTTATCTTCAACAGGGAACAGCGTTGTGGTTGTGGATAAAGACGAAAGAGCCTTTGATGCTTTGTCTTATG
AATTTACCGGATTTAAAATAGTCGGGAATGCAAACGAACTTGAAACGCTCAAACTTGCCAAAGTAAATAAGGCGGATTTC
GTTCTTTCGCTCACTCCTGACGACAATACGAATATAATGGTTGCTCTGGTATCAAAGGAAATCTTTGGTATTCCCCAGGT
AATCGCACGTGTTTATGACCCGAACAACCTTGACATGTTCTCACAGTTTGGGATAGAAATAATATGTCCTACTTTGCTTG
CGGTTGATAGTGTAAAGTCGGCTCTTTCATTTATGGGCGGTGAGGAAAAATGA

Upstream 100 bases:

>100_bases
AATACGTCATTTAAAAGCAGCTTTAGCTCTTGAACCAGGCTTTATGAGAGCGAAAAATGAACTCGAAAAACTTGAAAATT
CCGGGGATGGTGAAAAATAA

Downstream 100 bases:

>100_bases
AGGTAGCTATCATTGGTGGGAAAAACCTAACATACTACCTGGCAAAAGGATTGATTTCACGCGGCTACAGAGTTTATGTC
GTCAATAAAGACGAAGAGTA

Product: TrkA-N domain protein

Products: NA

Alternate protein names: K(+)-uptake protein trkA [H]

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MPIVKGALKKKGYFVVIFGCGRLGSRIANWLSSTGNSVVVVDKDERAFDALSYEFTGFKIVGNANELETLKLAKVNKADF
VLSLTPDDNTNIMVALVSKEIFGIPQVIARVYDPNNLDMFSQFGIEIICPTLLAVDSVKSALSFMGGEEK

Sequences:

>Translated_150_residues
MPIVKGALKKKGYFVVIFGCGRLGSRIANWLSSTGNSVVVVDKDERAFDALSYEFTGFKIVGNANELETLKLAKVNKADF
VLSLTPDDNTNIMVALVSKEIFGIPQVIARVYDPNNLDMFSQFGIEIICPTLLAVDSVKSALSFMGGEEK
>Mature_149_residues
PIVKGALKKKGYFVVIFGCGRLGSRIANWLSSTGNSVVVVDKDERAFDALSYEFTGFKIVGNANELETLKLAKVNKADFV
LSLTPDDNTNIMVALVSKEIFGIPQVIARVYDPNNLDMFSQFGIEIICPTLLAVDSVKSALSFMGGEEK

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 16343; Mature: 16212

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIVKGALKKKGYFVVIFGCGRLGSRIANWLSSTGNSVVVVDKDERAFDALSYEFTGFKI
CCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHEEECCCEEE
VGNANELETLKLAKVNKADFVLSLTPDDNTNIMVALVSKEIFGIPQVIARVYDPNNLDMF
EECCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCHHCCHHHHHHHHCCCCCCCHH
SQFGIEIICPTLLAVDSVKSALSFMGGEEK
HHCCHHEEHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PIVKGALKKKGYFVVIFGCGRLGSRIANWLSSTGNSVVVVDKDERAFDALSYEFTGFKI
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHEEECCCEEE
VGNANELETLKLAKVNKADFVLSLTPDDNTNIMVALVSKEIFGIPQVIARVYDPNNLDMF
EECCCCCCEEEEEECCCCCEEEEECCCCCCCEEEEEECCHHCCHHHHHHHHCCCCCCCHH
SQFGIEIICPTLLAVDSVKSALSFMGGEEK
HHCCHHEEHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12000953; 2294088 [H]