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The map label for this gene is trkA [H]

Identifier: 239616781

GI number: 239616781

Start: 391287

End: 391949

Strand: Direct

Name: trkA [H]

Synonym: Kole_0374

Alternate gene names: 239616781

Gene position: 391287-391949 (Clockwise)

Preceding gene: 239616780

Following gene: 239616782

Centisome position: 17.0

GC content: 43.44

Gene sequence:

>663_bases
ATGAAGGTAGCTATCATTGGTGGGAAAAACCTAACATACTACCTGGCAAAAGGATTGATTTCACGCGGCTACAGAGTTTA
TGTCGTCAATAAAGACGAAGAGTATTGTGTTGATCTTGCGAAACGTCTGAAAAAAGTTACCACAATCGTCGGTGATGGGG
CTAGGCGACATGTTCTTGAGCAACTTGAACTGAGCGAAGAAGACCAATTCATAGCTTTAACCCCCAATGACCAGGATAAT
CTCATAGCCTGTCTCACTGCACAAAGATTACTCGGGATCCGAAGACCGATAGCGCTAATTAACGATCCTGATAACAAGGA
AGTTTTTGCAAAAATGGGAATCACCGCAGCCATAAGCCCGATAGAGATGATTTCCATGACTTTAGAAGATAGCATTTTCC
GGGAGCAGATTACGAACCTTATACCAGCGTCCGAAAAACTCTCTGTTTTTCGGATAGATCTGCACAGCACAGCACCGGTA
ATAGGAAAAATGGTGAAAGATCTGGAACTTCCTGAAGAAAGTGTAATCGGGGCGATTATCAGAGGCGACGAGGTTATAAT
ACCCCGGGGTAACACGCAGATTTCCGAAAACGACACTCTCATAGTTCTAAGCAATCCCGCTGTTCAATCAAAAGTTTTTG
AAGCGTTATTGGGAGAGGTATAA

Upstream 100 bases:

>100_bases
TTGACATGTTCTCACAGTTTGGGATAGAAATAATATGTCCTACTTTGCTTGCGGTTGATAGTGTAAAGTCGGCTCTTTCA
TTTATGGGCGGTGAGGAAAA

Downstream 100 bases:

>100_bases
ATGTATCCAAAGGCATTAAAGAAACGATATAAAGTGATTTTTGGTTACATCGGGGAACTCTTTGTGTACTTTTCGGTCGC
GCTTTTAACGCCCTTAATAA

Product: TrkA-N domain protein

Products: NA

Alternate protein names: K(+)-uptake protein trkA homolog [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKVAIIGGKNLTYYLAKGLISRGYRVYVVNKDEEYCVDLAKRLKKVTTIVGDGARRHVLEQLELSEEDQFIALTPNDQDN
LIACLTAQRLLGIRRPIALINDPDNKEVFAKMGITAAISPIEMISMTLEDSIFREQITNLIPASEKLSVFRIDLHSTAPV
IGKMVKDLELPEESVIGAIIRGDEVIIPRGNTQISENDTLIVLSNPAVQSKVFEALLGEV

Sequences:

>Translated_220_residues
MKVAIIGGKNLTYYLAKGLISRGYRVYVVNKDEEYCVDLAKRLKKVTTIVGDGARRHVLEQLELSEEDQFIALTPNDQDN
LIACLTAQRLLGIRRPIALINDPDNKEVFAKMGITAAISPIEMISMTLEDSIFREQITNLIPASEKLSVFRIDLHSTAPV
IGKMVKDLELPEESVIGAIIRGDEVIIPRGNTQISENDTLIVLSNPAVQSKVFEALLGEV
>Mature_220_residues
MKVAIIGGKNLTYYLAKGLISRGYRVYVVNKDEEYCVDLAKRLKKVTTIVGDGARRHVLEQLELSEEDQFIALTPNDQDN
LIACLTAQRLLGIRRPIALINDPDNKEVFAKMGITAAISPIEMISMTLEDSIFREQITNLIPASEKLSVFRIDLHSTAPV
IGKMVKDLELPEESVIGAIIRGDEVIIPRGNTQISENDTLIVLSNPAVQSKVFEALLGEV

Specific function: Part of a potassium transport system [H]

COG id: COG0569

COG function: function code P; K+ transport systems, NAD-binding component

Gene ontology:

Cell location: Peripherally Bound To The Inner Side Of The Inner Membrane Via The Trkg And Trkh Proteins [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RCK N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1789685, Length=206, Percent_Identity=24.7572815533981, Blast_Score=83, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006036
- InterPro:   IPR016040
- InterPro:   IPR006037
- InterPro:   IPR003148 [H]

Pfam domain/function: PF02080 TrkA_C; PF02254 TrkA_N [H]

EC number: NA

Molecular weight: Translated: 24345; Mature: 24345

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVAIIGGKNLTYYLAKGLISRGYRVYVVNKDEEYCVDLAKRLKKVTTIVGDGARRHVLE
CEEEEECCCCHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QLELSEEDQFIALTPNDQDNLIACLTAQRLLGIRRPIALINDPDNKEVFAKMGITAAISP
HHCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCCHHHCCH
IEMISMTLEDSIFREQITNLIPASEKLSVFRIDLHSTAPVIGKMVKDLELPEESVIGAII
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHEEEE
RGDEVIIPRGNTQISENDTLIVLSNPAVQSKVFEALLGEV
ECCEEEEECCCCEECCCCEEEEEECCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVAIIGGKNLTYYLAKGLISRGYRVYVVNKDEEYCVDLAKRLKKVTTIVGDGARRHVLE
CEEEEECCCCHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
QLELSEEDQFIALTPNDQDNLIACLTAQRLLGIRRPIALINDPDNKEVFAKMGITAAISP
HHCCCCCCCEEEECCCCCCCEEHHHHHHHHHHHCCCEEEECCCCCHHHHHHHCCHHHCCH
IEMISMTLEDSIFREQITNLIPASEKLSVFRIDLHSTAPVIGKMVKDLELPEESVIGAII
HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHEEEE
RGDEVIIPRGNTQISENDTLIVLSNPAVQSKVFEALLGEV
ECCEEEEECCCCEECCCCEEEEEECCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]