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The map label for this gene is atpC [H]

Identifier: 239616624

GI number: 239616624

Start: 246570

End: 246986

Strand: Reverse

Name: atpC [H]

Synonym: Kole_0217

Alternate gene names: 239616624

Gene position: 246986-246570 (Counterclockwise)

Preceding gene: 239616625

Following gene: 239616617

Centisome position: 10.73

GC content: 46.52

Gene sequence:

>417_bases
ATGTCCCTGAATGTTTCGATTGTGACGCCCTATGCCAAAGTATGGGAAGGCGAAGCTGAATATCTTTCTTTCAGGACACC
TTTTGGAGAGATGGGCTTTTTGCCACAACGCGCTCCCATCGTTGCACAGCTGGCGGTCGATGTAATAGAGATCAAAAGCA
AAGGAGAAAGACTCCTTTTCGCCGTTCACGGCGGTTACATTCTGAACACGCGTGAGAAGACGCTTATAGTGGCTGACGCT
GCCGAACGTCCGGAAGATATCGATATTCATAGAGCAGAAGAACGCGTAAAACGTGCGGAAGAGATTTTGAAAGTGGAGAG
GGACGCGAGAAAACGCGCACGTGCAAACGCAAAAATGCAGAGACATCTTTTAAGAATACGGGTGTATAAAGAACATACAC
AGACTGAACATAAATAA

Upstream 100 bases:

>100_bases
GAAAACATGACGACCTTCCCGAACAGGCCTTCATGATGGTGGGAACCATCGACGAGGCTGTAGAAAAAGCCAGGAAACTC
GGCTACGGAGGCTGAGGCGC

Downstream 100 bases:

>100_bases
TAAATAAAGGAGGGCTTTTAGCCCTCCTTTTTATTTTTGTTTCTTTTTGTAAAAGCCGCTATCAGATCCGTTTTTCGTTC
TTCGCCCCGTATGAGCCTCA

Product: ATP synthase F1, epsilon subunit

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit [H]

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSLNVSIVTPYAKVWEGEAEYLSFRTPFGEMGFLPQRAPIVAQLAVDVIEIKSKGERLLFAVHGGYILNTREKTLIVADA
AERPEDIDIHRAEERVKRAEEILKVERDARKRARANAKMQRHLLRIRVYKEHTQTEHK

Sequences:

>Translated_138_residues
MSLNVSIVTPYAKVWEGEAEYLSFRTPFGEMGFLPQRAPIVAQLAVDVIEIKSKGERLLFAVHGGYILNTREKTLIVADA
AERPEDIDIHRAEERVKRAEEILKVERDARKRARANAKMQRHLLRIRVYKEHTQTEHK
>Mature_137_residues
SLNVSIVTPYAKVWEGEAEYLSFRTPFGEMGFLPQRAPIVAQLAVDVIEIKSKGERLLFAVHGGYILNTREKTLIVADAA
ERPEDIDIHRAEERVKRAEEILKVERDARKRARANAKMQRHLLRIRVYKEHTQTEHK

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- ProDom:   PD000944 [H]

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N [H]

EC number: 3.6.3.14

Molecular weight: Translated: 15962; Mature: 15830

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNVSIVTPYAKVWEGEAEYLSFRTPFGEMGFLPQRAPIVAQLAVDVIEIKSKGERLLF
CCEEEEEECCHHHHHCCCHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
AVHGGYILNTREKTLIVADAAERPEDIDIHRAEERVKRAEEILKVERDARKRARANAKMQ
EEECCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHLLRIRVYKEHTQTEHK
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SLNVSIVTPYAKVWEGEAEYLSFRTPFGEMGFLPQRAPIVAQLAVDVIEIKSKGERLLF
CEEEEEECCHHHHHCCCHHEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEE
AVHGGYILNTREKTLIVADAAERPEDIDIHRAEERVKRAEEILKVERDARKRARANAKMQ
EEECCEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHLLRIRVYKEHTQTEHK
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]