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The map label for this gene is slpA [H]

Identifier: 239616617

GI number: 239616617

Start: 238088

End: 239485

Strand: Reverse

Name: slpA [H]

Synonym: Kole_0210

Alternate gene names: 239616617

Gene position: 239485-238088 (Counterclockwise)

Preceding gene: 239616624

Following gene: 239616616

Centisome position: 10.4

GC content: 42.99

Gene sequence:

>1398_bases
ATGAAATTAAAGATCCTGGCTCCCTTAATGATTTTCGTGTTGCTTGCAGGATTTGCTTTTGCGGCCGTTTATACGGATGT
TTCTCCGAGTCATTGGGCCTATGATTCCATCGTCAGGCTGACAGATCTCGGTATTTTGAGCGGTATATCTGAGGGAGGAC
TTTACTACTTCAAAGGGGACGATCCGCTGACGCGTTACCAGGCGGCAGTTCTTCTTGACAAATTTCTCACCTATCTGGAA
GAAAAGGGTGTTTCTGGAGCGTCTGAAGCGGTTTCAGGCGAGGCAATCGAAAAGATCAGAGAACAGCTCGGCATTTTCGA
AACGATTCTCAAAGACCAGAAAGGCGAATACATCGATCTTGCCGATATTCTCGGCAGGCTGGAAAAACTCGAAAAAGAGG
TTGCTGATCTTCAGAGCAAAGGGATTATACCGGCTCTGGGAGAAGGAACCGATTTAAAGAAATTCTTTGATAAACTCCAG
AGTTTTGGTGAAAGCGTTGCCGAGCTAAAGCGCGATCTGGAGGGGAAATTCAGTGAATTGTCTGAGAACGTCAATGTTCT
CGAAAAGACACTGAATGCCACGTTATCAGAGATCGAGGTCAATCTGAAAACGCTGAATGAAAGCGTTCTCGGCCACTCCA
ATGAGATCAGCGGGCTTTCCAAAAGAATCACAGCTGCTGGAAATAGAGTCGCAACCCTGGAAAACAAGGTTGAGTCGCTC
TGGAATTTAACGGGCAGTTTTGTTAAAACAGAAGAGTTCAAGGCCCTTGAAGACAGGATGACCGGGGTAGAGGCTAAGCT
CTCTGAGTTTGTTACCTGGAAGGATCTTGGCAGCAAACTCGAAGACTACGCCACAGTCAAAGATCTTGAAGAAATGAACA
CGAGCATTTCAGGGCTTCAGATGGAGGTTCTGGGATTAAAGAAGCGTTTGGATAAGGTGGAGGAATCCTCTGTTTCCAAA
GATAGTCTTGCTCCTTTGATAAGTGAACTTGAAAACCTGAAAACTAGCACTACTGATCTGGAAAAGGAAGTAGAAAAAAA
AGTAGAATCTATTGATAAGGCTTTAATGTTTTCGGGAAATAAAGTGGATACACTGGAAGGATTAAAATCAGATGTTGAGA
CTTTGAAAAGTATTGTTGCGAAGCTTAACAAAAACACGCCTGAGATTGAAAATGCCTTAAAATTCTTGGTGGATGATGTT
GATACTTTGAATAGTACTGTAACTGAATTGAGTAGTCAGCTTGTGGAACTTAGGAAAGACGTGCCGGAGAACATTAATCT
TGAAGAAATCAAAAAGAGAACGGAGACAGCTTTTTGGGTAGGATTTGGAGGAATTGTCTTTGGAATTGCAGGAATTGTGA
TTGGTATTATTGCATTTTGGTATCCACCATCACCGTAA

Upstream 100 bases:

>100_bases
GTTGCCACCTCCTGATTTTAAATATTACCACGATTGGCCACAATAGGCGTGACGTTTTATGGTAGAATTTTAAGCGAATA
TACCATTGGGAGGTGAATGT

Downstream 100 bases:

>100_bases
ACAACAAAGACAATCTTACATAAAAAATCCCCGGGAAATGTCCCGGGGTTTTTTGTTATAATCTAAGAAAGGAACGGGAA
AAGAACGCGGATCTGGAGGT

Product: S-layer domain protein

Products: NA

Alternate protein names: P100 protein; Surface layer protein [H]

Number of amino acids: Translated: 465; Mature: 465

Protein sequence:

>465_residues
MKLKILAPLMIFVLLAGFAFAAVYTDVSPSHWAYDSIVRLTDLGILSGISEGGLYYFKGDDPLTRYQAAVLLDKFLTYLE
EKGVSGASEAVSGEAIEKIREQLGIFETILKDQKGEYIDLADILGRLEKLEKEVADLQSKGIIPALGEGTDLKKFFDKLQ
SFGESVAELKRDLEGKFSELSENVNVLEKTLNATLSEIEVNLKTLNESVLGHSNEISGLSKRITAAGNRVATLENKVESL
WNLTGSFVKTEEFKALEDRMTGVEAKLSEFVTWKDLGSKLEDYATVKDLEEMNTSISGLQMEVLGLKKRLDKVEESSVSK
DSLAPLISELENLKTSTTDLEKEVEKKVESIDKALMFSGNKVDTLEGLKSDVETLKSIVAKLNKNTPEIENALKFLVDDV
DTLNSTVTELSSQLVELRKDVPENINLEEIKKRTETAFWVGFGGIVFGIAGIVIGIIAFWYPPSP

Sequences:

>Translated_465_residues
MKLKILAPLMIFVLLAGFAFAAVYTDVSPSHWAYDSIVRLTDLGILSGISEGGLYYFKGDDPLTRYQAAVLLDKFLTYLE
EKGVSGASEAVSGEAIEKIREQLGIFETILKDQKGEYIDLADILGRLEKLEKEVADLQSKGIIPALGEGTDLKKFFDKLQ
SFGESVAELKRDLEGKFSELSENVNVLEKTLNATLSEIEVNLKTLNESVLGHSNEISGLSKRITAAGNRVATLENKVESL
WNLTGSFVKTEEFKALEDRMTGVEAKLSEFVTWKDLGSKLEDYATVKDLEEMNTSISGLQMEVLGLKKRLDKVEESSVSK
DSLAPLISELENLKTSTTDLEKEVEKKVESIDKALMFSGNKVDTLEGLKSDVETLKSIVAKLNKNTPEIENALKFLVDDV
DTLNSTVTELSSQLVELRKDVPENINLEEIKKRTETAFWVGFGGIVFGIAGIVIGIIAFWYPPSP
>Mature_465_residues
MKLKILAPLMIFVLLAGFAFAAVYTDVSPSHWAYDSIVRLTDLGILSGISEGGLYYFKGDDPLTRYQAAVLLDKFLTYLE
EKGVSGASEAVSGEAIEKIREQLGIFETILKDQKGEYIDLADILGRLEKLEKEVADLQSKGIIPALGEGTDLKKFFDKLQ
SFGESVAELKRDLEGKFSELSENVNVLEKTLNATLSEIEVNLKTLNESVLGHSNEISGLSKRITAAGNRVATLENKVESL
WNLTGSFVKTEEFKALEDRMTGVEAKLSEFVTWKDLGSKLEDYATVKDLEEMNTSISGLQMEVLGLKKRLDKVEESSVSK
DSLAPLISELENLKTSTTDLEKEVEKKVESIDKALMFSGNKVDTLEGLKSDVETLKSIVAKLNKNTPEIENALKFLVDDV
DTLNSTVTELSSQLVELRKDVPENINLEEIKKRTETAFWVGFGGIVFGIAGIVIGIIAFWYPPSP

Specific function: The S-layer is a paracrystalline mono-layered assembly of proteins which coat the surface of bacteria [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall, S-layer. Note=This bacterium is covered by a S-layer with hexagonal symmetry (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SLH (S-layer homology) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001119 [H]

Pfam domain/function: PF00395 SLH [H]

EC number: NA

Molecular weight: Translated: 51341; Mature: 51341

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKILAPLMIFVLLAGFAFAAVYTDVSPSHWAYDSIVRLTDLGILSGISEGGLYYFKGD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
DPLTRYQAAVLLDKFLTYLEEKGVSGASEAVSGEAIEKIREQLGIFETILKDQKGEYIDL
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEECH
ADILGRLEKLEKEVADLQSKGIIPALGEGTDLKKFFDKLQSFGESVAELKRDLEGKFSEL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SENVNVLEKTLNATLSEIEVNLKTLNESVLGHSNEISGLSKRITAAGNRVATLENKVESL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
WNLTGSFVKTEEFKALEDRMTGVEAKLSEFVTWKDLGSKLEDYATVKDLEEMNTSISGLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MEVLGLKKRLDKVEESSVSKDSLAPLISELENLKTSTTDLEKEVEKKVESIDKALMFSGN
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
KVDTLEGLKSDVETLKSIVAKLNKNTPEIENALKFLVDDVDTLNSTVTELSSQLVELRKD
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPENINLEEIKKRTETAFWVGFGGIVFGIAGIVIGIIAFWYPPSP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKLKILAPLMIFVLLAGFAFAAVYTDVSPSHWAYDSIVRLTDLGILSGISEGGLYYFKGD
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
DPLTRYQAAVLLDKFLTYLEEKGVSGASEAVSGEAIEKIREQLGIFETILKDQKGEYIDL
CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEECH
ADILGRLEKLEKEVADLQSKGIIPALGEGTDLKKFFDKLQSFGESVAELKRDLEGKFSEL
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SENVNVLEKTLNATLSEIEVNLKTLNESVLGHSNEISGLSKRITAAGNRVATLENKVESL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
WNLTGSFVKTEEFKALEDRMTGVEAKLSEFVTWKDLGSKLEDYATVKDLEEMNTSISGLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
MEVLGLKKRLDKVEESSVSKDSLAPLISELENLKTSTTDLEKEVEKKVESIDKALMFSGN
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
KVDTLEGLKSDVETLKSIVAKLNKNTPEIENALKFLVDDVDTLNSTVTELSSQLVELRKD
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPENINLEEIKKRTETAFWVGFGGIVFGIAGIVIGIIAFWYPPSP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA