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The map label for this gene is 238922681

Identifier: 238922681

GI number: 238922681

Start: 239989

End: 241689

Strand: Direct

Name: 238922681

Synonym: EUBREC_0256

Alternate gene names: NA

Gene position: 239989-241689 (Clockwise)

Preceding gene: 238922680

Following gene: 238922682

Centisome position: 6.96

GC content: 44.8

Gene sequence:

>1701_bases
ATGAGTATGGATATGAAAAAAAGAAGCTTCAAAAAATTAATTACACTTTCGCTTACACTTGCAATGCTGACAGGTGTGGC
AGGCTGTGGAAAGCAGCAGAGCTTAAATGCTGAGACAAATCCGGACACACCGGTATCAGATGTGCAGTTCCCTCTGAAGG
AGAAGGCTGAGCTGTCATTTATCACAAGTGCACCGGCCACATCCACACAGGATCCTAATGAGAGGACTATCTTCAAGAGA
ATGGAGAAGCAGACCAACGTGCATATCGACTGGACATGCTTCGTTTCAGACCAGTTCTCTGACAAGAAGAATCTGGCATT
GGCGCAGTTTGGTAATCTGCCGGATGGACTGTTTAATGCAGGTATGAGTGATTACGACCTGCTCAGATATGCAAAGCAGG
GTATCATTATTCCGGTAGAGAATCTGATCGATAAATATATGCCTAATCTTCAGGCAGTTTTTGAGAAATATCCTGAATAT
AGGACAATGTGTACCGCACCGGACGGACATATCTATTCATTTCCTTGGATAGAGCAGCTTGGTGCAGGAAAAGAGGCAAT
TCAGGCAATCGGAGATATACCTTATATCAACAAGAAATGGCTTGATTATCTGGGACTTGAGGTGCCGACTACTACAGACG
AGCTCGAGCAGGTGCTTATTGCATTCAGAGATCATGCAGACGAGCTTGAGAAAGAGTTTGACATTGAGGGCGGTGTCATT
CCTATGTCATTTATTATAAACAACGGTGACCAGGATCCAGCCATCCTCATGAACGGCTTTGGTGAGGGTTATGGTGATAC
AGGTGACCACTTTGCAGTAACAGATGAGGGAAAAGTCATCTATACTCCTACACAGGAGGGCTACAAGGAGGGTATCGAGT
GGCTTCACAAGCTTGTCACAGAGGATTTGATTGACCCTGAGGCATTTACACAGGAGTGGTCAACATATGTAGCAAAGGGT
AAAAACCACAGATACGGGCTCTGCTTTACATGGGACATTGCAAACATTGACAATAACACAGATTACGTCATGCTTCCTGC
TCTCACAGGACCTGACGGAGTCAGAAATATCACCAGACAGAATAACAGTGAGACGAGTGGTTTCGACAGAGGACGATGCG
TACTGACATCAAGCTGCAGGGATACGGCTTTGGCAGCCGCGTGGATTGATCAGATGTATGCTCCAATCCAGTCACCACAG
AATAACTGGGGAACATACGGCGAGAAAGATTCGTTCAACATCTTTGAGATGAGCACAAACGATGAGGGTGGACAGATGTT
AAAGCATATGGATCTGGGCGATCAGTCACCGGTTGAGGTGCGTGAGGCGCAGTCTGTAAACGGACCGCTTGCTGTTTTAA
ATGAGTACTATGATGTTTATGTGACAGAGCCTGCAGATGCCAAGTGGCGTCTCGACAACATGCATGAGGCTTATCTGAAG
GACATGAACAGTAAGTATGTCTATCCAAACGTGTTCATGAGCATAGATGACACCAACAAGGTGTCACAGTACGACACAGA
CATCAAGAAATATGCTGAGCAGAAAAAGGCCGACTGGATATTAAACGGCGGCATTGATAAGGAATGGGATTCATACCTTA
AGAAACTTAATAAATATGGTTTACAGGATTATCTGAAGATAAAGCAGAAATATTTTGACAGCTATCAGAAATCCCTTGAG
AGTACGTCAGAGGGCAAATAG

Upstream 100 bases:

>100_bases
TTGTTGTATCAAGTTTACCACTTTTGATTATGTATCCATTTTTCCAGAAATATTTTGATAAAGGAATCATGGTTGGATCT
GTTAAGGGCTAACAGAAAGG

Downstream 100 bases:

>100_bases
GTTACTGTTCATAATTCTGTATTACCGGCAAAGCAAACAGAATTGGAGGATTTGAATGAGCGAATTATTGGAAAAAGCAA
GAAGCTACGAGGCAAAAAAA

Product: ABC transporter, substrate-binding protein

Products: NA

Alternate protein names: ABC Transporter; Lipoprotein LplA; Sugar ABC Transporter Periplasmic Protein; ABC Transporter Membrane Spanning Protein; Abc-Type Sugar Transport System Periplasmic Component

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MSMDMKKRSFKKLITLSLTLAMLTGVAGCGKQQSLNAETNPDTPVSDVQFPLKEKAELSFITSAPATSTQDPNERTIFKR
MEKQTNVHIDWTCFVSDQFSDKKNLALAQFGNLPDGLFNAGMSDYDLLRYAKQGIIIPVENLIDKYMPNLQAVFEKYPEY
RTMCTAPDGHIYSFPWIEQLGAGKEAIQAIGDIPYINKKWLDYLGLEVPTTTDELEQVLIAFRDHADELEKEFDIEGGVI
PMSFIINNGDQDPAILMNGFGEGYGDTGDHFAVTDEGKVIYTPTQEGYKEGIEWLHKLVTEDLIDPEAFTQEWSTYVAKG
KNHRYGLCFTWDIANIDNNTDYVMLPALTGPDGVRNITRQNNSETSGFDRGRCVLTSSCRDTALAAAWIDQMYAPIQSPQ
NNWGTYGEKDSFNIFEMSTNDEGGQMLKHMDLGDQSPVEVREAQSVNGPLAVLNEYYDVYVTEPADAKWRLDNMHEAYLK
DMNSKYVYPNVFMSIDDTNKVSQYDTDIKKYAEQKKADWILNGGIDKEWDSYLKKLNKYGLQDYLKIKQKYFDSYQKSLE
STSEGK

Sequences:

>Translated_566_residues
MSMDMKKRSFKKLITLSLTLAMLTGVAGCGKQQSLNAETNPDTPVSDVQFPLKEKAELSFITSAPATSTQDPNERTIFKR
MEKQTNVHIDWTCFVSDQFSDKKNLALAQFGNLPDGLFNAGMSDYDLLRYAKQGIIIPVENLIDKYMPNLQAVFEKYPEY
RTMCTAPDGHIYSFPWIEQLGAGKEAIQAIGDIPYINKKWLDYLGLEVPTTTDELEQVLIAFRDHADELEKEFDIEGGVI
PMSFIINNGDQDPAILMNGFGEGYGDTGDHFAVTDEGKVIYTPTQEGYKEGIEWLHKLVTEDLIDPEAFTQEWSTYVAKG
KNHRYGLCFTWDIANIDNNTDYVMLPALTGPDGVRNITRQNNSETSGFDRGRCVLTSSCRDTALAAAWIDQMYAPIQSPQ
NNWGTYGEKDSFNIFEMSTNDEGGQMLKHMDLGDQSPVEVREAQSVNGPLAVLNEYYDVYVTEPADAKWRLDNMHEAYLK
DMNSKYVYPNVFMSIDDTNKVSQYDTDIKKYAEQKKADWILNGGIDKEWDSYLKKLNKYGLQDYLKIKQKYFDSYQKSLE
STSEGK
>Mature_565_residues
SMDMKKRSFKKLITLSLTLAMLTGVAGCGKQQSLNAETNPDTPVSDVQFPLKEKAELSFITSAPATSTQDPNERTIFKRM
EKQTNVHIDWTCFVSDQFSDKKNLALAQFGNLPDGLFNAGMSDYDLLRYAKQGIIIPVENLIDKYMPNLQAVFEKYPEYR
TMCTAPDGHIYSFPWIEQLGAGKEAIQAIGDIPYINKKWLDYLGLEVPTTTDELEQVLIAFRDHADELEKEFDIEGGVIP
MSFIINNGDQDPAILMNGFGEGYGDTGDHFAVTDEGKVIYTPTQEGYKEGIEWLHKLVTEDLIDPEAFTQEWSTYVAKGK
NHRYGLCFTWDIANIDNNTDYVMLPALTGPDGVRNITRQNNSETSGFDRGRCVLTSSCRDTALAAAWIDQMYAPIQSPQN
NWGTYGEKDSFNIFEMSTNDEGGQMLKHMDLGDQSPVEVREAQSVNGPLAVLNEYYDVYVTEPADAKWRLDNMHEAYLKD
MNSKYVYPNVFMSIDDTNKVSQYDTDIKKYAEQKKADWILNGGIDKEWDSYLKKLNKYGLQDYLKIKQKYFDSYQKSLES
TSEGK

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64225; Mature: 64093

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMDMKKRSFKKLITLSLTLAMLTGVAGCGKQQSLNAETNPDTPVSDVQFPLKEKAELSF
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEE
ITSAPATSTQDPNERTIFKRMEKQTNVHIDWTCFVSDQFSDKKNLALAQFGNLPDGLFNA
EECCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCEEHHHHCCCCCHHHHC
GMSDYDLLRYAKQGIIIPVENLIDKYMPNLQAVFEKYPEYRTMCTAPDGHIYSFPWIEQL
CCCHHHHHHHHHCCCEEEHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCEECCCHHHHH
GAGKEAIQAIGDIPYINKKWLDYLGLEVPTTTDELEQVLIAFRDHADELEKEFDIEGGVI
CCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
PMSFIINNGDQDPAILMNGFGEGYGDTGDHFAVTDEGKVIYTPTQEGYKEGIEWLHKLVT
EEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHH
EDLIDPEAFTQEWSTYVAKGKNHRYGLCFTWDIANIDNNTDYVMLPALTGPDGVRNITRQ
HHCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHC
NNSETSGFDRGRCVLTSSCRDTALAAAWIDQMYAPIQSPQNNWGTYGEKDSFNIFEMSTN
CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
DEGGQMLKHMDLGDQSPVEVREAQSVNGPLAVLNEYYDVYVTEPADAKWRLDNMHEAYLK
CCHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH
DMNSKYVYPNVFMSIDDTNKVSQYDTDIKKYAEQKKADWILNGGIDKEWDSYLKKLNKYG
HCCCCEECCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHC
LQDYLKIKQKYFDSYQKSLESTSEGK
HHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SMDMKKRSFKKLITLSLTLAMLTGVAGCGKQQSLNAETNPDTPVSDVQFPLKEKAELSF
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEE
ITSAPATSTQDPNERTIFKRMEKQTNVHIDWTCFVSDQFSDKKNLALAQFGNLPDGLFNA
EECCCCCCCCCCCHHHHHHHHHHHCCEEEEEEEEECCCCCCCCCEEHHHHCCCCCHHHHC
GMSDYDLLRYAKQGIIIPVENLIDKYMPNLQAVFEKYPEYRTMCTAPDGHIYSFPWIEQL
CCCHHHHHHHHHCCCEEEHHHHHHHHCCHHHHHHHHCCCCCEEEECCCCCEECCCHHHHH
GAGKEAIQAIGDIPYINKKWLDYLGLEVPTTTDELEQVLIAFRDHADELEKEFDIEGGVI
CCCHHHHHHHCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
PMSFIINNGDQDPAILMNGFGEGYGDTGDHFAVTDEGKVIYTPTQEGYKEGIEWLHKLVT
EEEEEEECCCCCCEEEEECCCCCCCCCCCEEEEECCCEEEECCCHHHHHHHHHHHHHHHH
EDLIDPEAFTQEWSTYVAKGKNHRYGLCFTWDIANIDNNTDYVMLPALTGPDGVRNITRQ
HHCCCHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCEEEEECCCCCHHHHHHHHC
NNSETSGFDRGRCVLTSSCRDTALAAAWIDQMYAPIQSPQNNWGTYGEKDSFNIFEMSTN
CCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC
DEGGQMLKHMDLGDQSPVEVREAQSVNGPLAVLNEYYDVYVTEPADAKWRLDNMHEAYLK
CCHHHHHHHCCCCCCCCCHHHHHHCCCCHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHH
DMNSKYVYPNVFMSIDDTNKVSQYDTDIKKYAEQKKADWILNGGIDKEWDSYLKKLNKYG
HCCCCEECCEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHC
LQDYLKIKQKYFDSYQKSLESTSEGK
HHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA