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The map label for this gene is tnpA1 [H]

Identifier: 238921916

GI number: 238921916

Start: 120951

End: 121169

Strand: Reverse

Name: tnpA1 [H]

Synonym: EUBELI_20150

Alternate gene names: 238921916

Gene position: 121169-120951 (Counterclockwise)

Preceding gene: 238921917

Following gene: 238921915

Centisome position: 19.33

GC content: 38.36

Gene sequence:

>219_bases
ATGTACATTGCAATTCCACCGAAACTATGTGTTTCAGAGTTTATGTCATATCTGAAGGGAAAAAGCACATTGATGTTGTT
TGACCGACATCCGGAATATAGGAGCAAGTGGGGAGATAGACATTTTTGGGCGAGAGGATATTACGTATCGACAGTAGGAA
ATGTGAATGAAGAAACGGTAAGAAAATACATACAGGAACAGGAAGAAAACGATAAGTAA

Upstream 100 bases:

>100_bases
TGGTGAAACAAAGAGAGATTTAGTAGAAACAATCAAAAAATTGTGTGAGATGAAATAGGTAACACTAACAGATGGAAAAG
TATGTATTGATCATGTACAT

Downstream 100 bases:

>100_bases
GAAGATGGAAGGAAGTAATGAGCTTCCTTTAGGAAGCAACAAGTAATTATGGTGTTGCGAAACCCCGCCTTTGGTGGAAC
CAGTATAATACCCTGGAGGG

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MYIAIPPKLCVSEFMSYLKGKSTLMLFDRHPEYRSKWGDRHFWARGYYVSTVGNVNEETVRKYIQEQEENDK

Sequences:

>Translated_72_residues
MYIAIPPKLCVSEFMSYLKGKSTLMLFDRHPEYRSKWGDRHFWARGYYVSTVGNVNEETVRKYIQEQEENDK
>Mature_72_residues
MYIAIPPKLCVSEFMSYLKGKSTLMLFDRHPEYRSKWGDRHFWARGYYVSTVGNVNEETVRKYIQEQEENDK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 8668; Mature: 8668

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYIAIPPKLCVSEFMSYLKGKSTLMLFDRHPEYRSKWGDRHFWARGYYVSTVGNVNEETV
CEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCCCCEEECCEEEECCCCCCHHHH
RKYIQEQEENDK
HHHHHHHHCCCC
>Mature Secondary Structure
MYIAIPPKLCVSEFMSYLKGKSTLMLFDRHPEYRSKWGDRHFWARGYYVSTVGNVNEETV
CEEECCHHHHHHHHHHHHCCCCEEEEEECCCCHHHCCCCCCEEECCEEEECCCCCCHHHH
RKYIQEQEENDK
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]