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The map label for this gene is tnpA1 [H]

Identifier: 238921917

GI number: 238921917

Start: 121212

End: 121355

Strand: Reverse

Name: tnpA1 [H]

Synonym: EUBELI_20151

Alternate gene names: 238921917

Gene position: 121355-121212 (Counterclockwise)

Preceding gene: 238921918

Following gene: 238921916

Centisome position: 19.36

GC content: 29.17

Gene sequence:

>144_bases
ATGGATAATCAAAGTATAACACACACACGCTGGAATTGCACATATCACATTGTTTTTATTCCAAAGTTTAGAAGAAAAAT
AATGTATGGTGAAACAAAGAGAGATTTAGTAGAAACAATCAAAAAATTGTGTGAGATGAAATAG

Upstream 100 bases:

>100_bases
GGCAAAGCTGTAGCGTTACCTAGAGTGCTAGAAAATAAAACCTTGCGTGTTATAATGATATTGGTTTCGCAGACCATATC
AAAACACAGGAGGTATCCAA

Downstream 100 bases:

>100_bases
GTAACACTAACAGATGGAAAAGTATGTATTGATCATGTACATATGTACATTGCAATTCCACCGAAACTATGTGTTTCAGA
GTTTATGTCATATCTGAAGG

Product: putative transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 47; Mature: 47

Protein sequence:

>47_residues
MDNQSITHTRWNCTYHIVFIPKFRRKIMYGETKRDLVETIKKLCEMK

Sequences:

>Translated_47_residues
MDNQSITHTRWNCTYHIVFIPKFRRKIMYGETKRDLVETIKKLCEMK
>Mature_47_residues
MDNQSITHTRWNCTYHIVFIPKFRRKIMYGETKRDLVETIKKLCEMK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 5804; Mature: 5804

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
10.6 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
10.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNQSITHTRWNCTYHIVFIPKFRRKIMYGETKRDLVETIKKLCEMK
CCCCCCCEEECCEEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDNQSITHTRWNCTYHIVFIPKFRRKIMYGETKRDLVETIKKLCEMK
CCCCCCCEEECCEEEEEEECCCHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]