| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is 238921759
Identifier: 238921759
GI number: 238921759
Start: 3805285
End: 3805404
Strand: Direct
Name: 238921759
Synonym: NT01EI_3928
Alternate gene names: NA
Gene position: 3805285-3805404 (Clockwise)
Preceding gene: 238921757
Following gene: 238921761
Centisome position: 99.82
GC content: 58.33
Gene sequence:
>120_bases GTGTCGTACATGACGCTCAGGCTTATCACTGGCTATCAGGCGGTTATCGATCAGATCGCCGTTGTGTGGCAGATGTTCCT GGCACAGGCTTTCCGGCAGTGGCTGCTCGCCGTCGGGTAG
Upstream 100 bases:
>100_bases GTGATTTCTCCCTGGGTGCGATCGGCTGCGTGTTGGCATACTGTGACGGAGAATCCTGCATTAGGCGTATGGGGTACAGC GCGCCCAGACGTTACGTGGG
Downstream 100 bases:
>100_bases ACGACTGGCGCTGACGCTCGGGATCAGCGGCAGCGTCAGTAGCGCAAGAGCATGGACACGCTTATGGAGAGTAAATCCTT TTTATCAAACATGTCGGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 39; Mature: 38
Protein sequence:
>39_residues MSYMTLRLITGYQAVIDQIAVVWQMFLAQAFRQWLLAVG
Sequences:
>Translated_39_residues MSYMTLRLITGYQAVIDQIAVVWQMFLAQAFRQWLLAVG >Mature_38_residues SYMTLRLITGYQAVIDQIAVVWQMFLAQAFRQWLLAVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4534; Mature: 4402
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.7 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYMTLRLITGYQAVIDQIAVVWQMFLAQAFRQWLLAVG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SYMTLRLITGYQAVIDQIAVVWQMFLAQAFRQWLLAVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA