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The map label for this gene is ydjX [H]

Identifier: 238921761

GI number: 238921761

Start: 3806525

End: 3807187

Strand: Direct

Name: ydjX [H]

Synonym: NT01EI_3930

Alternate gene names: 238921761

Gene position: 3806525-3807187 (Clockwise)

Preceding gene: 238921759

Following gene: 238921762

Centisome position: 99.85

GC content: 57.47

Gene sequence:

>663_bases
ATGTTGGCGCTGGTGGCTGCTGCGATCGGTTGCACGCCGCTGCGCACGCTGAGCGGCGATCTGGCGGCGCTGCAGCGTCT
GCTGGGGGAGATGGGGTTTGTCTATGGCGCGCTGGGCTATATGATCCTGTTTATTGCCGCCTCGCTGATGCTGTTTCCGG
GCAGTATTCTGGTGATCGCGGCGGCGATGCTGTTTGGGGTATGGTGGGGAACGCTATTTTCACTGTTGGCGGCGACGCTG
GCATCCGCCTGCGCCTTTCTGCTGGCGCGGTATTTGGGGCGTGACTGGCTACAGGCCCGTTTTGGGTCGCGTCCCCTGTT
TCAGCGGATCACTTTGGGGATGACGCGCTATGGCGTCGACTTTTTGATTTTTACCCGCCTGGTGCCGCTGTTTCCCTACA
ATATTCAAAACTATGTATATGGGCTGACGGACATCGGCTTTTGGCGATATACCTGGATTTCAGCGTTAACGCTGTTACCG
GGGACATTTCTCTACAGCTATATGGCGGCGACATTGGCGCAAAATGGGGTGACCTGGCAGGTTAGCGTAGAACTGCTGCT
GTGCGGCCTGCTGCTGTTTGTCATTACCCAGGCGGCACGCCAGGTATACCGTCATTGTCTCGGCGCGGTATGCGATAGTC
CAGATACGGTGTCAGATGACTGA

Upstream 100 bases:

>100_bases
TGGCATAGCGCACTGATTTGGTTACCACGCTAGCGAGGAATACGAAATAAGAGGAGACATGCGATGGAAAAGAAGGCGTA
AACCTTGGCGGCGATGGGGG

Downstream 100 bases:

>100_bases
GGTTGTACGAGGAGATAAGAATGGATAGCCATCAGCTGTTTTGTCAGGAGATGGCCGGCGTGAAGCCGCTGGTCCCGGAT
CGCCGCGTGTCGACGGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MLALVAAAIGCTPLRTLSGDLAALQRLLGEMGFVYGALGYMILFIAASLMLFPGSILVIAAAMLFGVWWGTLFSLLAATL
ASACAFLLARYLGRDWLQARFGSRPLFQRITLGMTRYGVDFLIFTRLVPLFPYNIQNYVYGLTDIGFWRYTWISALTLLP
GTFLYSYMAATLAQNGVTWQVSVELLLCGLLLFVITQAARQVYRHCLGAVCDSPDTVSDD

Sequences:

>Translated_220_residues
MLALVAAAIGCTPLRTLSGDLAALQRLLGEMGFVYGALGYMILFIAASLMLFPGSILVIAAAMLFGVWWGTLFSLLAATL
ASACAFLLARYLGRDWLQARFGSRPLFQRITLGMTRYGVDFLIFTRLVPLFPYNIQNYVYGLTDIGFWRYTWISALTLLP
GTFLYSYMAATLAQNGVTWQVSVELLLCGLLLFVITQAARQVYRHCLGAVCDSPDTVSDD
>Mature_220_residues
MLALVAAAIGCTPLRTLSGDLAALQRLLGEMGFVYGALGYMILFIAASLMLFPGSILVIAAAMLFGVWWGTLFSLLAATL
ASACAFLLARYLGRDWLQARFGSRPLFQRITLGMTRYGVDFLIFTRLVPLFPYNIQNYVYGLTDIGFWRYTWISALTLLP
GTFLYSYMAATLAQNGVTWQVSVELLLCGLLLFVITQAARQVYRHCLGAVCDSPDTVSDD

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=223, Percent_Identity=52.4663677130045, Blast_Score=199, Evalue=1e-52,
Organism=Escherichia coli, GI1788049, Length=163, Percent_Identity=26.9938650306748, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24228; Mature: 24228

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLALVAAAIGCTPLRTLSGDLAALQRLLGEMGFVYGALGYMILFIAASLMLFPGSILVIA
CHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AAMLFGVWWGTLFSLLAATLASACAFLLARYLGRDWLQARFGSRPLFQRITLGMTRYGVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FLIFTRLVPLFPYNIQNYVYGLTDIGFWRYTWISALTLLPGTFLYSYMAATLAQNGVTWQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
VSVELLLCGLLLFVITQAARQVYRHCLGAVCDSPDTVSDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MLALVAAAIGCTPLRTLSGDLAALQRLLGEMGFVYGALGYMILFIAASLMLFPGSILVIA
CHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
AAMLFGVWWGTLFSLLAATLASACAFLLARYLGRDWLQARFGSRPLFQRITLGMTRYGVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FLIFTRLVPLFPYNIQNYVYGLTDIGFWRYTWISALTLLPGTFLYSYMAATLAQNGVTWQ
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
VSVELLLCGLLLFVITQAARQVYRHCLGAVCDSPDTVSDD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]