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The map label for this gene is nagD [H]

Identifier: 238920793

GI number: 238920793

Start: 2806051

End: 2806803

Strand: Direct

Name: nagD [H]

Synonym: NT01EI_2912

Alternate gene names: 238920793

Gene position: 2806051-2806803 (Clockwise)

Preceding gene: 238920791

Following gene: 238920794

Centisome position: 73.6

GC content: 59.76

Gene sequence:

>753_bases
ATGACAATAAAAAGCGTTATTTGCGATATCGACGGCGTCCTGATGCACGATAATACGCCGGTTCCCGGCGCCCGTGAGTT
TTTACAGCGACTGCAGCAGCGGGAGATGCCGCTGGTGATCCTGACCAACTACCCCTCACAGACCGGGCAGGATCTGGCCA
ACCGTTTTGCCTCCGCCGGCATCGACATCCCTGAGCAGGTGTTCTATACCTCCGCCATGGCCACCGCTGATTTCCTCAGG
CGACAGGAGGGCAAGAAAGCCTACGTCATCGGCGAGGGGGCACTGATCCACGAGCTGTACAAGGCCGGTTTCACCATTAC
CGACATCAACCCGGACTTCGTGATCGTTGGCGAGACCCGCTCCTATAACTGGGAGATGATCCACAAGGCGGCCTACTTCG
TCGCCCATGGCGCGCGCTTTATCGCCACCAACCCCGACTCCCACGGCCGCGGCTTCTTTCCCGCCTGCGGCGCCCTGTGC
GCACCGATTGAACTGATCGCCGGGCGTTCACCCTTTTTTGTCGGCAAACCCAGCCCGTGGATTATCCGCGCCGCGCTGAA
CAAGATGCAGGCCCATTCGGAAAACACGGTGATCGTCGGCGATAACCTGAAAACCGATATTCTGGCCGGCTTTCAGGCGG
GGCTGGAGACCATCCTGGTGCTCTCCGGCGTCTCCACCCTGGAGGACGTGGACACCATGCCCTTCCGCCCCAGCTATATT
TACCCCTCCGTGGCCGACATCGATATCCTGTAA

Upstream 100 bases:

>100_bases
ATTGCCATCATCCGACCCTGCGGGCGGGCGCGAAGCAGGCGATAATACGCTCAGCCGTGGTATAGTCTTTAACTGCATTA
TCAACGAGAAGCTCCAAGAT

Downstream 100 bases:

>100_bases
TTCCCCTGCCAGGCGGCCTGGCCGCCTTTTTTAGATCTTTTTTAAAAAAATTGCGATTTTGTTATTGTTTCTCTAAAGAT
AGATGCAGGGAAAAAAATTT

Product: UMP phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 249

Protein sequence:

>250_residues
MTIKSVICDIDGVLMHDNTPVPGAREFLQRLQQREMPLVILTNYPSQTGQDLANRFASAGIDIPEQVFYTSAMATADFLR
RQEGKKAYVIGEGALIHELYKAGFTITDINPDFVIVGETRSYNWEMIHKAAYFVAHGARFIATNPDSHGRGFFPACGALC
APIELIAGRSPFFVGKPSPWIIRAALNKMQAHSENTVIVGDNLKTDILAGFQAGLETILVLSGVSTLEDVDTMPFRPSYI
YPSVADIDIL

Sequences:

>Translated_250_residues
MTIKSVICDIDGVLMHDNTPVPGAREFLQRLQQREMPLVILTNYPSQTGQDLANRFASAGIDIPEQVFYTSAMATADFLR
RQEGKKAYVIGEGALIHELYKAGFTITDINPDFVIVGETRSYNWEMIHKAAYFVAHGARFIATNPDSHGRGFFPACGALC
APIELIAGRSPFFVGKPSPWIIRAALNKMQAHSENTVIVGDNLKTDILAGFQAGLETILVLSGVSTLEDVDTMPFRPSYI
YPSVADIDIL
>Mature_249_residues
TIKSVICDIDGVLMHDNTPVPGAREFLQRLQQREMPLVILTNYPSQTGQDLANRFASAGIDIPEQVFYTSAMATADFLRR
QEGKKAYVIGEGALIHELYKAGFTITDINPDFVIVGETRSYNWEMIHKAAYFVAHGARFIATNPDSHGRGFFPACGALCA
PIELIAGRSPFFVGKPSPWIIRAALNKMQAHSENTVIVGDNLKTDILAGFQAGLETILVLSGVSTLEDVDTMPFRPSYIY
PSVADIDIL

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI108796653, Length=264, Percent_Identity=33.3333333333333, Blast_Score=102, Evalue=2e-22,
Organism=Homo sapiens, GI10092677, Length=273, Percent_Identity=29.6703296703297, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI14149777, Length=251, Percent_Identity=25.0996015936255, Blast_Score=83, Evalue=3e-16,
Organism=Escherichia coli, GI1786890, Length=250, Percent_Identity=84, Blast_Score=456, Evalue=1e-130,
Organism=Caenorhabditis elegans, GI17562458, Length=284, Percent_Identity=27.4647887323944, Blast_Score=97, Evalue=9e-21,
Organism=Caenorhabditis elegans, GI17560956, Length=284, Percent_Identity=27.4647887323944, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17558880, Length=281, Percent_Identity=27.7580071174377, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71984613, Length=270, Percent_Identity=26.6666666666667, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193210059, Length=260, Percent_Identity=25.3846153846154, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17562356, Length=233, Percent_Identity=23.6051502145923, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6319965, Length=238, Percent_Identity=27.7310924369748, Blast_Score=85, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24666141, Length=253, Percent_Identity=28.4584980237154, Blast_Score=107, Evalue=1e-23,
Organism=Drosophila melanogaster, GI24656326, Length=254, Percent_Identity=28.740157480315, Blast_Score=104, Evalue=6e-23,
Organism=Drosophila melanogaster, GI22026920, Length=243, Percent_Identity=29.2181069958848, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24666137, Length=290, Percent_Identity=27.5862068965517, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24656330, Length=275, Percent_Identity=26.1818181818182, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI19920940, Length=249, Percent_Identity=23.2931726907631, Blast_Score=78, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 27468; Mature: 27337

Theoretical pI: Translated: 5.29; Mature: 5.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKSVICDIDGVLMHDNTPVPGAREFLQRLQQREMPLVILTNYPSQTGQDLANRFASAG
CCHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCC
IDIPEQVFYTSAMATADFLRRQEGKKAYVIGEGALIHELYKAGFTITDINPDFVIVGETR
CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCEEEECCCCEEEEECCC
SYNWEMIHKAAYFVAHGARFIATNPDSHGRGFFPACGALCAPIELIAGRSPFFVGKPSPW
CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCH
IIRAALNKMQAHSENTVIVGDNLKTDILAGFQAGLETILVLSGVSTLEDVDTMPFRPSYI
HHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCC
YPSVADIDIL
CCCCCCEECC
>Mature Secondary Structure 
TIKSVICDIDGVLMHDNTPVPGAREFLQRLQQREMPLVILTNYPSQTGQDLANRFASAG
CHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHCC
IDIPEQVFYTSAMATADFLRRQEGKKAYVIGEGALIHELYKAGFTITDINPDFVIVGETR
CCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCEEEECCCCEEEEECCC
SYNWEMIHKAAYFVAHGARFIATNPDSHGRGFFPACGALCAPIELIAGRSPFFVGKPSPW
CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEECCCCCH
IIRAALNKMQAHSENTVIVGDNLKTDILAGFQAGLETILVLSGVSTLEDVDTMPFRPSYI
HHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCC
YPSVADIDIL
CCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]