| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920711
Identifier: 238920711
GI number: 238920711
Start: 2715878
End: 2716150
Strand: Reverse
Name: 238920711
Synonym: NT01EI_2824
Alternate gene names: NA
Gene position: 2716150-2715878 (Counterclockwise)
Preceding gene: 238920712
Following gene: 238920710
Centisome position: 71.25
GC content: 65.2
Gene sequence:
>273_bases ATGAACCCATCACGCGATCCCCTGCACGGGGTAACCCTGGAAGCCCTGCTGACGGCGTTGGTAGCGCGCTACGGCTGGCC GGAGCTCGGCCGTCGCATCGCCATCAACTGCTTTCTGAGCGATCCCAGCATTAAATCCAGCCTGAAGTTTCTGCGTCGGA CACCCTGGGCCCGCGCCAAGGTCGAAGCGCTGTATCTGGACTCCCTGCAGTCAGAGGTGCCTGCTGCGGATACCCCCTGG GGCGGTTGGCGGCAGCGCGGCGACGGCGAGTGA
Upstream 100 bases:
>100_bases GCGAGCAGTTTAAGAATGCGTCCTAGGCGCACAGCTTTTGCTTGCCCGGCGGCTCCTGTGCCGTTAGGGTAAGCCCCCTT TTATGCCAAGCGGAGACACT
Downstream 100 bases:
>100_bases ATCCCTGTTGCGGACGGATGGGGAGCTCAGTACTCTCTGCGCCGGTCACGCATGGCGTGAGGGGAGAATCTGAGGATAAT GCGATGCTGAAAGTGAAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MNPSRDPLHGVTLEALLTALVARYGWPELGRRIAINCFLSDPSIKSSLKFLRRTPWARAKVEALYLDSLQSEVPAADTPW GGWRQRGDGE
Sequences:
>Translated_90_residues MNPSRDPLHGVTLEALLTALVARYGWPELGRRIAINCFLSDPSIKSSLKFLRRTPWARAKVEALYLDSLQSEVPAADTPW GGWRQRGDGE >Mature_90_residues MNPSRDPLHGVTLEALLTALVARYGWPELGRRIAINCFLSDPSIKSSLKFLRRTPWARAKVEALYLDSLQSEVPAADTPW GGWRQRGDGE
Specific function: Unknown
COG id: COG4628
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10078; Mature: 10078
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPSRDPLHGVTLEALLTALVARYGWPELGRRIAINCFLSDPSIKSSLKFLRRTPWARAK CCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCEEEEEEEECCCCHHHHHHHHHHCCCCHHH VEALYLDSLQSEVPAADTPWGGWRQRGDGE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNPSRDPLHGVTLEALLTALVARYGWPELGRRIAINCFLSDPSIKSSLKFLRRTPWARAK CCCCCCCCCCCCHHHHHHHHHHHCCCHHHCCEEEEEEEECCCCHHHHHHHHHHCCCCHHH VEALYLDSLQSEVPAADTPWGGWRQRGDGE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA