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The map label for this gene is dsbE [H]

Identifier: 238920651

GI number: 238920651

Start: 2661810

End: 2662364

Strand: Reverse

Name: dsbE [H]

Synonym: NT01EI_2763

Alternate gene names: 238920651

Gene position: 2662364-2661810 (Counterclockwise)

Preceding gene: 238920652

Following gene: 238920650

Centisome position: 69.84

GC content: 56.58

Gene sequence:

>555_bases
ATGAACCGTAAACTGCTTTTTATTCCGCTGGCGCTGTTTTTACTGCTGGTGCTGGCGTTTCTGATCCAGCTGCAGCGTAA
CGCCAGCGGCGAAGACCCCACGATGCTGGAGTCGGCGCTGATCGGTAAGCCGGTACCTGAGTTCCGCCTTGCCTCGTTGG
ATACGCCGGGAAAAACCTACAGCCAGTCGGTTTTGCGCGACGGAAAGCCGCTGCTGCTGAACGTATGGGCCACCTGGTGC
CCAACCTGCTATGCCGAACATCAGTATCTGAATACCCTGGCGGCGCGCGGAGTCCGGGTGGTCGGCCTGAATTATAAGGA
TGACCGTCAGAAGGCGATAAAATGGCTGAACGAGCTGGGGAATCCCTATGCGTTGAGCCTGTATGACGGTGACGGCATGC
TGGGGCTGGATCTGGGGGTTTACGGTGCACCGGAGACCTTCCTGATCGACGGCAACGGCATCGTTCGCTATCGTCACGCC
GGCGATCTTAATGAACGAATCTGGAAGGAAGAGATTGAACCGCTGTGGCTGAAATATCAGGGAGGTCAATCATGA

Upstream 100 bases:

>100_bases
ACGGTGGCGTGCTGATGTCGCTCGGTGGGATGCTGTGCATGCTGGATCCACGTTACCGCAGCGCGCGTCGCGCCAAGGAT
GCTCAGGAGAAGAAAACGGC

Downstream 100 bases:

>100_bases
CGGGACTACGCGGAGCCCTGCTGGCGCTGGGATTGCTGTTGCCCGGCGTCCTGTGGGCGGCGGTGATCGATACCTATAAC
TTTACCAGCGAGGCGCAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome c biogenesis protein CcmG [H]

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MNRKLLFIPLALFLLLVLAFLIQLQRNASGEDPTMLESALIGKPVPEFRLASLDTPGKTYSQSVLRDGKPLLLNVWATWC
PTCYAEHQYLNTLAARGVRVVGLNYKDDRQKAIKWLNELGNPYALSLYDGDGMLGLDLGVYGAPETFLIDGNGIVRYRHA
GDLNERIWKEEIEPLWLKYQGGQS

Sequences:

>Translated_184_residues
MNRKLLFIPLALFLLLVLAFLIQLQRNASGEDPTMLESALIGKPVPEFRLASLDTPGKTYSQSVLRDGKPLLLNVWATWC
PTCYAEHQYLNTLAARGVRVVGLNYKDDRQKAIKWLNELGNPYALSLYDGDGMLGLDLGVYGAPETFLIDGNGIVRYRHA
GDLNERIWKEEIEPLWLKYQGGQS
>Mature_184_residues
MNRKLLFIPLALFLLLVLAFLIQLQRNASGEDPTMLESALIGKPVPEFRLASLDTPGKTYSQSVLRDGKPLLLNVWATWC
PTCYAEHQYLNTLAARGVRVVGLNYKDDRQKAIKWLNELGNPYALSLYDGDGMLGLDLGVYGAPETFLIDGNGIVRYRHA
GDLNERIWKEEIEPLWLKYQGGQS

Specific function: Involved in disulfide bond formation. Catalyzes a late, reductive step in the assembly of periplasmic c-type cytochromes, probably the reduction of disulfide bonds of the apocytochrome c to allow covalent linkage with the heme. Possible subunit of a heme

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Escherichia coli, GI1788523, Length=179, Percent_Identity=77.0949720670391, Blast_Score=294, Evalue=3e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004799
- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: NA

Molecular weight: Translated: 20710; Mature: 20710

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRKLLFIPLALFLLLVLAFLIQLQRNASGEDPTMLESALIGKPVPEFRLASLDTPGKTY
CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCHH
SQSVLRDGKPLLLNVWATWCPTCYAEHQYLNTLAARGVRVVGLNYKDDRQKAIKWLNELG
HHHHHHCCCCEEEEEHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCC
NPYALSLYDGDGMLGLDLGVYGAPETFLIDGNGIVRYRHAGDLNERIWKEEIEPLWLKYQ
CCEEEEEECCCCEEEEEECCCCCCCEEEEECCCEEEEECCCCHHHHHHHHCCCEEEEEEC
GGQS
CCCC
>Mature Secondary Structure
MNRKLLFIPLALFLLLVLAFLIQLQRNASGEDPTMLESALIGKPVPEFRLASLDTPGKTY
CCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCHH
SQSVLRDGKPLLLNVWATWCPTCYAEHQYLNTLAARGVRVVGLNYKDDRQKAIKWLNELG
HHHHHHCCCCEEEEEHHHHCCHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHHHHHCC
NPYALSLYDGDGMLGLDLGVYGAPETFLIDGNGIVRYRHAGDLNERIWKEEIEPLWLKYQ
CCEEEEEECCCCEEEEEECCCCCCCEEEEECCCEEEEECCCCHHHHHHHHCCCEEEEEEC
GGQS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]