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The map label for this gene is yfbU [C]

Identifier: 238920579

GI number: 238920579

Start: 2586856

End: 2587350

Strand: Reverse

Name: yfbU [C]

Synonym: NT01EI_2691

Alternate gene names: 238920579

Gene position: 2587350-2586856 (Counterclockwise)

Preceding gene: 238920580

Following gene: 238920578

Centisome position: 67.87

GC content: 53.33

Gene sequence:

>495_bases
ATGGAAATGACCAATGCACAGCGCCTGCTCCTCTCCAATCAGTATAAAATGATGTCGATGCTCGATCCGGAGAACGCCGA
ACGCTACCGCCGTCTGCAGACGATCATTGAGCGGGGGTTTGGCCTGCAGTTGCGCGAGTTGGATCGTGATTTTGGCGAAC
TGCCGGAAGAGACCTGTCGCAGTATCATCGATATAATGGAGATGCATCACGCGCTGCAGGTCTCTTACAATAACCTGAAA
GATCGTCAGGATATCGATGCGCGCCGCCTGGAGTTCCTGGGATTCGATGCGGCGACGGAGGCGCGCTATCTGAGCTACGT
CCGTTTTCTGGTGAATACTGAAGGGCGCTATACCCACTTTGACTGCGGCTCCCATGGTTTTAACGCCCAGACCAAAATGT
GGGATAAGTACCTGCGCATGCTGGCCGTCTGGCATGCCTGTCCGCGCCAGTACCATTTAAGTGCCGTCGAGATTATGCAA
ATTTTGAATGCGTAA

Upstream 100 bases:

>100_bases
TTTTTATTGCACTGTCGATGAATTTGGCAATATGTCATGCTGAGTGGCGAATATTGACCGTGGTAACTCTGGCCGTCGTC
GGCCGATAAGGACAGTAAAG

Downstream 100 bases:

>100_bases
CGGCGGTTGATTTTGTCATGAGGAGTACCCGTGAAGTGTAAAGGTTTTTTGTTTGACCTCGATGGAACCCTGGTGGATTC
ATTGCCGGTGGTTGAACGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 164

Protein sequence:

>164_residues
MEMTNAQRLLLSNQYKMMSMLDPENAERYRRLQTIIERGFGLQLRELDRDFGELPEETCRSIIDIMEMHHALQVSYNNLK
DRQDIDARRLEFLGFDAATEARYLSYVRFLVNTEGRYTHFDCGSHGFNAQTKMWDKYLRMLAVWHACPRQYHLSAVEIMQ
ILNA

Sequences:

>Translated_164_residues
MEMTNAQRLLLSNQYKMMSMLDPENAERYRRLQTIIERGFGLQLRELDRDFGELPEETCRSIIDIMEMHHALQVSYNNLK
DRQDIDARRLEFLGFDAATEARYLSYVRFLVNTEGRYTHFDCGSHGFNAQTKMWDKYLRMLAVWHACPRQYHLSAVEIMQ
ILNA
>Mature_164_residues
MEMTNAQRLLLSNQYKMMSMLDPENAERYRRLQTIIERGFGLQLRELDRDFGELPEETCRSIIDIMEMHHALQVSYNNLK
DRQDIDARRLEFLGFDAATEARYLSYVRFLVNTEGRYTHFDCGSHGFNAQTKMWDKYLRMLAVWHACPRQYHLSAVEIMQ
ILNA

Specific function: Unknown

COG id: COG3013

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0304 family

Homologues:

Organism=Escherichia coli, GI87082081, Length=164, Percent_Identity=81.7073170731707, Blast_Score=290, Evalue=3e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2691_EDWI9 (C5B8J8)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002934094.1
- ProteinModelPortal:   C5B8J8
- GeneID:   7961717
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_2691
- OMA:   ADHHFNS
- ProtClustDB:   PRK05445
- HAMAP:   MF_00762
- InterPro:   IPR005587
- InterPro:   IPR023146
- InterPro:   IPR023145
- Gene3D:   G3DSA:1.10.3190.10
- Gene3D:   G3DSA:1.10.287.680
- PIRSF:   PIRSF006272
- ProDom:   PD035118

Pfam domain/function: PF03887 YfbU

EC number: NA

Molecular weight: Translated: 19490; Mature: 19490

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMTNAQRLLLSNQYKMMSMLDPENAERYRRLQTIIERGFGLQLRELDRDFGELPEETCR
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHH
SIIDIMEMHHALQVSYNNLKDRQDIDARRLEFLGFDAATEARYLSYVRFLVNTEGRYTHF
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEE
DCGSHGFNAQTKMWDKYLRMLAVWHACPRQYHLSAVEIMQILNA
CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEMTNAQRLLLSNQYKMMSMLDPENAERYRRLQTIIERGFGLQLRELDRDFGELPEETCR
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHH
SIIDIMEMHHALQVSYNNLKDRQDIDARRLEFLGFDAATEARYLSYVRFLVNTEGRYTHF
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEE
DCGSHGFNAQTKMWDKYLRMLAVWHACPRQYHLSAVEIMQILNA
CCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA