Click here to switch to the map view.

The map label for this gene is yfbV [C]

Identifier: 238920580

GI number: 238920580

Start: 2587565

End: 2588020

Strand: Reverse

Name: yfbV [C]

Synonym: NT01EI_2692

Alternate gene names: 238920580

Gene position: 2588020-2587565 (Counterclockwise)

Preceding gene: 238920581

Following gene: 238920579

Centisome position: 67.89

GC content: 60.53

Gene sequence:

>456_bases
ATGTCATCAGCCCCCACGCCACACGTCGCCTGGTTTCGCCTTTTCCAGCGCGGTCAGATCTATATGAAGACCTGGCCGAA
TGAAAAACGTCTGGCGCCGGTGTTCCCGGAAAACCGTGTGACCCGCGCTACCCGCTTCGCCATTCGCTTTATGCCGCCGA
TAGCCATGTTTACCCTGTGTTGGCAAATTGCCCTGGGCGGTCAGCTGGGGCCAGCCATTGCGACGGCGCTGTTTGCCTGT
AGCCTACCGATGCAGGGGCTGTGGTGGCTGGGCAAACGCGCGGTAACGCCGCTGCCGCCGACGCTGCTACAGTGGTTTCA
TCAGCTGCGCGACAAGTTGCAGGCCTCCGGCATTGCCTTGGCGCCCGTCGACGGTGCGCCGACCTACCAGTCGCTGGCGG
AGCTGTTGCGCCGCTGCTGTAAGCAGTTGGATAAAACATTTCTGGATGATATCTAA

Upstream 100 bases:

>100_bases
CGATAGCGGCCTTTAAAAACAAAATAAATTTGATGCTGCATATTTTTTGTTTTCATTTTGCGTTTTTTTTTTAACTATTA
TCGAATAAATTGAGGTTGTC

Downstream 100 bases:

>100_bases
GTGCTGGTGTTAATTATTTGTGCTCGAGATTGGGGTGTCGTGATAATTAATGGTCGCGGGTGGCGTTTGTTAGGCTTTTT
ACTGGTCCAAATCTTTGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSSAPTPHVAWFRLFQRGQIYMKTWPNEKRLAPVFPENRVTRATRFAIRFMPPIAMFTLCWQIALGGQLGPAIATALFAC
SLPMQGLWWLGKRAVTPLPPTLLQWFHQLRDKLQASGIALAPVDGAPTYQSLAELLRRCCKQLDKTFLDDI

Sequences:

>Translated_151_residues
MSSAPTPHVAWFRLFQRGQIYMKTWPNEKRLAPVFPENRVTRATRFAIRFMPPIAMFTLCWQIALGGQLGPAIATALFAC
SLPMQGLWWLGKRAVTPLPPTLLQWFHQLRDKLQASGIALAPVDGAPTYQSLAELLRRCCKQLDKTFLDDI
>Mature_150_residues
SSAPTPHVAWFRLFQRGQIYMKTWPNEKRLAPVFPENRVTRATRFAIRFMPPIAMFTLCWQIALGGQLGPAIATALFACS
LPMQGLWWLGKRAVTPLPPTLLQWFHQLRDKLQASGIALAPVDGAPTYQSLAELLRRCCKQLDKTFLDDI

Specific function: Unknown

COG id: COG3092

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0208 family

Homologues:

Organism=Escherichia coli, GI1788632, Length=151, Percent_Identity=72.1854304635762, Blast_Score=228, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2692_EDWI9 (C5B8J9)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002934095.1
- GeneID:   7961718
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_2692
- OMA:   FACSLPM
- ProtClustDB:   PRK01816
- HAMAP:   MF_01101
- InterPro:   IPR007334

Pfam domain/function: PF04217 DUF412

EC number: NA

Molecular weight: Translated: 17110; Mature: 16979

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1ea1bb3c)-; HASH(0x1e8fe2f0)-;

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSAPTPHVAWFRLFQRGQIYMKTWPNEKRLAPVFPENRVTRATRFAIRFMPPIAMFTLC
CCCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
WQIALGGQLGPAIATALFACSLPMQGLWWLGKRAVTPLPPTLLQWFHQLRDKLQASGIAL
HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEE
APVDGAPTYQSLAELLRRCCKQLDKTFLDDI
ECCCCCCCHHHHHHHHHHHHHHHHHHHHCCH
>Mature Secondary Structure 
SSAPTPHVAWFRLFQRGQIYMKTWPNEKRLAPVFPENRVTRATRFAIRFMPPIAMFTLC
CCCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHH
WQIALGGQLGPAIATALFACSLPMQGLWWLGKRAVTPLPPTLLQWFHQLRDKLQASGIAL
HHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCEEE
APVDGAPTYQSLAELLRRCCKQLDKTFLDDI
ECCCCCCCHHHHHHHHHHHHHHHHHHHHCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA