| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
Click here to switch to the map view.
The map label for this gene is yfbT [H]
Identifier: 238920578
GI number: 238920578
Start: 2586175
End: 2586825
Strand: Reverse
Name: yfbT [H]
Synonym: NT01EI_2690
Alternate gene names: 238920578
Gene position: 2586825-2586175 (Counterclockwise)
Preceding gene: 238920579
Following gene: 238920577
Centisome position: 67.85
GC content: 61.9
Gene sequence:
>651_bases GTGAAGTGTAAAGGTTTTTTGTTTGACCTCGATGGAACCCTGGTGGATTCATTGCCGGTGGTTGAACGTTCGTGGATTAA CTGGGCCAAGCGTCAGGGGATCAATCCTCAGCAAGTATTGGAATTTATTCATGGTAAGCAGGCAATCACCTCCCTGCGCC ACTTTATGCCGGACGCCGATGAGGCGCGCCTGCAGGAGGAGTTTGACTGGCTGGAGGCGCTGGAGTCGCGCGACACCGAC GGTATCGCCGCGCTGCCTGGTGCCGCCGCGCTGATTGCCCGTCTCGATGCGCTGGCGATCCCTTGGGGGATCGTGACCTC GGGGTCGGTGCCGGTAGCCTACGCGCGCTGTAAGGCCGCCGGGCTGCCTAAGCCGGCGGTGTTTGTCACCGCAGAGCAGG TGCAGCGTGGCAAGCCGGAGCCGGATGCCTATTTGCTTGGGGCACAAAGGCTGGGGCTGGCGCCGGGCGCCTGTGCGGTG GTCGAGGATGCCCCGGCCGGGATCCTGGCCGGATTGACCGCGGGTTGTCAGGTGATCGCCGTCAATGCCCCGTCGGATAC CCTCAAGCTGGATAAAGTCACGCTCAATCTGCACAGTCTGGCGCAAATCACGCTGACGCGCGTTGATGATGATGCCGAGA TCACGCTGTAG
Upstream 100 bases:
>100_bases CGTCTGGCATGCCTGTCCGCGCCAGTACCATTTAAGTGCCGTCGAGATTATGCAAATTTTGAATGCGTAACGGCGGTTGA TTTTGTCATGAGGAGTACCC
Downstream 100 bases:
>100_bases ACAATGTGTAAATGGAAAAGTCGATTAACCCCGCCTGTGCGGGGTTTTTTTATGGCATGATTCAGGATAACTAACCCGTT TTTGTTATTCGTCGATGCCG
Product: phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 216; Mature: 216
Protein sequence:
>216_residues MKCKGFLFDLDGTLVDSLPVVERSWINWAKRQGINPQQVLEFIHGKQAITSLRHFMPDADEARLQEEFDWLEALESRDTD GIAALPGAAALIARLDALAIPWGIVTSGSVPVAYARCKAAGLPKPAVFVTAEQVQRGKPEPDAYLLGAQRLGLAPGACAV VEDAPAGILAGLTAGCQVIAVNAPSDTLKLDKVTLNLHSLAQITLTRVDDDAEITL
Sequences:
>Translated_216_residues MKCKGFLFDLDGTLVDSLPVVERSWINWAKRQGINPQQVLEFIHGKQAITSLRHFMPDADEARLQEEFDWLEALESRDTD GIAALPGAAALIARLDALAIPWGIVTSGSVPVAYARCKAAGLPKPAVFVTAEQVQRGKPEPDAYLLGAQRLGLAPGACAV VEDAPAGILAGLTAGCQVIAVNAPSDTLKLDKVTLNLHSLAQITLTRVDDDAEITL >Mature_216_residues MKCKGFLFDLDGTLVDSLPVVERSWINWAKRQGINPQQVLEFIHGKQAITSLRHFMPDADEARLQEEFDWLEALESRDTD GIAALPGAAALIARLDALAIPWGIVTSGSVPVAYARCKAAGLPKPAVFVTAEQVQRGKPEPDAYLLGAQRLGLAPGACAV VEDAPAGILAGLTAGCQVIAVNAPSDTLKLDKVTLNLHSLAQITLTRVDDDAEITL
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate glucose 6-phosphate [H]
COG id: COG0637
COG function: function code R; Predicted phosphatase/phosphohexomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family [H]
Homologues:
Organism=Homo sapiens, GI197382691, Length=208, Percent_Identity=32.6923076923077, Blast_Score=66, Evalue=3e-11, Organism=Escherichia coli, GI87082080, Length=207, Percent_Identity=69.5652173913043, Blast_Score=279, Evalue=1e-76, Organism=Escherichia coli, GI1787576, Length=195, Percent_Identity=30.2564102564103, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1789046, Length=191, Percent_Identity=30.3664921465969, Blast_Score=63, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6321834, Length=202, Percent_Identity=30.1980198019802, Blast_Score=91, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6321833, Length=202, Percent_Identity=29.2079207920792, Blast_Score=90, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6320905, Length=197, Percent_Identity=32.48730964467, Blast_Score=78, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6322136, Length=197, Percent_Identity=31.4720812182741, Blast_Score=75, Evalue=7e-15, Organism=Drosophila melanogaster, GI20129151, Length=217, Percent_Identity=29.9539170506912, Blast_Score=74, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006402 - InterPro: IPR005833 - InterPro: IPR023198 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 23032; Mature: 23032
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKCKGFLFDLDGTLVDSLPVVERSWINWAKRQGINPQQVLEFIHGKQAITSLRHFMPDAD CCCCEEEEECCCCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCH EARLQEEFDWLEALESRDTDGIAALPGAAALIARLDALAIPWGIVTSGSVPVAYARCKAA HHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHC GLPKPAVFVTAEQVQRGKPEPDAYLLGAQRLGLAPGACAVVEDAPAGILAGLTAGCQVIA CCCCCEEEEEHHHHHCCCCCCCEEEECHHHHCCCCCCEEEECCCCCHHHHHHCCCCEEEE VNAPSDTLKLDKVTLNLHSLAQITLTRVDDDAEITL EECCCCCEEEEEEEECHHHHEEEEEEEECCCCEECC >Mature Secondary Structure MKCKGFLFDLDGTLVDSLPVVERSWINWAKRQGINPQQVLEFIHGKQAITSLRHFMPDAD CCCCEEEEECCCCHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCH EARLQEEFDWLEALESRDTDGIAALPGAAALIARLDALAIPWGIVTSGSVPVAYARCKAA HHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHC GLPKPAVFVTAEQVQRGKPEPDAYLLGAQRLGLAPGACAVVEDAPAGILAGLTAGCQVIA CCCCCEEEEEHHHHHCCCCCCCEEEECHHHHCCCCCCEEEECCCCCHHHHHHCCCCEEEE VNAPSDTLKLDKVTLNLHSLAQITLTRVDDDAEITL EECCCCCEEEEEEEECHHHHEEEEEEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 10493123 [H]