| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920474
Identifier: 238920474
GI number: 238920474
Start: 2479687
End: 2480013
Strand: Reverse
Name: 238920474
Synonym: NT01EI_2585
Alternate gene names: NA
Gene position: 2480013-2479687 (Counterclockwise)
Preceding gene: 238920479
Following gene: 238920473
Centisome position: 65.05
GC content: 52.6
Gene sequence:
>327_bases ATGAAGCGTGAAAGCTTATCACTGGTGAAGATTGTCGTTATGGGGATGTTACTGGGGGCCGGATTGGCCGGTACCCCTGT CCAGGCCGCTGGCTCGGGAGTGGTACAGTTTGGTGGTATGATTGTGGAGGATGGTTGTCAGTTTAAAATAGTAAATAATC AGGTCTATTCCGAATGTTATCGGGACGGTAAAGCCCAGACGGCTACACACAGCGTTGAGCAGGTACAGCAGGGGGCCATG GCTCTACCGGCCCAGGTTGGCGAGAGCCATCTGAGCTGGCTGGATAATGCGCATGCGCAGGCGTTAATCACTGTCTCTTA TCGTTAA
Upstream 100 bases:
>100_bases TTTTAGGAGAGGTGTTAACAAGGAGTGTCACCGCTTTTTCATTCGCGATCGACGTTTGGCGAGATGAAAATACGCAGTAA CTTGACGACGGGAGTGATAT
Downstream 100 bases:
>100_bases GTGTCCTGCCTGGAACGTCCCTGTCAGGGCAGGGGCGTTCTTCATTATCATATTTAACCGTTATCTGCCTGCGCGTCCGC GCCCTCCTTTTTATTAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MKRESLSLVKIVVMGMLLGAGLAGTPVQAAGSGVVQFGGMIVEDGCQFKIVNNQVYSECYRDGKAQTATHSVEQVQQGAM ALPAQVGESHLSWLDNAHAQALITVSYR
Sequences:
>Translated_108_residues MKRESLSLVKIVVMGMLLGAGLAGTPVQAAGSGVVQFGGMIVEDGCQFKIVNNQVYSECYRDGKAQTATHSVEQVQQGAM ALPAQVGESHLSWLDNAHAQALITVSYR >Mature_108_residues MKRESLSLVKIVVMGMLLGAGLAGTPVQAAGSGVVQFGGMIVEDGCQFKIVNNQVYSECYRDGKAQTATHSVEQVQQGAM ALPAQVGESHLSWLDNAHAQALITVSYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11450; Mature: 11450
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRESLSLVKIVVMGMLLGAGLAGTPVQAAGSGVVQFGGMIVEDGCQFKIVNNQVYSECY CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCEEECCCCEEEEECHHHHHHHH RDGKAQTATHSVEQVQQGAMALPAQVGESHLSWLDNAHAQALITVSYR HCCCCCHHHHHHHHHHHCHHHCCHHHCHHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure MKRESLSLVKIVVMGMLLGAGLAGTPVQAAGSGVVQFGGMIVEDGCQFKIVNNQVYSECY CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCEEECCCCEEEEECHHHHHHHH RDGKAQTATHSVEQVQQGAMALPAQVGESHLSWLDNAHAQALITVSYR HCCCCCHHHHHHHHHHHCHHHCCHHHCHHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA