| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is fruA [H]
Identifier: 238920479
GI number: 238920479
Start: 2484181
End: 2485878
Strand: Reverse
Name: fruA [H]
Synonym: NT01EI_2590
Alternate gene names: 238920479
Gene position: 2485878-2484181 (Counterclockwise)
Preceding gene: 238920480
Following gene: 238920474
Centisome position: 65.21
GC content: 65.49
Gene sequence:
>1698_bases ATGAATACCCTACTGATTACGGAAGGTGCGCAGGGCGAGGCCCGCTGTTTCCTTGCCAGGCGTATGCTGGAGGCCGTCGC CGCCCAGCAGCAGATTACCTGGGTTACCCGCCCGCAGGATGCGGCGCTGGTGCTGTTTATCGGTGACGATACCCCGCAGG ACGCCGCGCTGGAGGGGAAACCGCTGTACCGGGGCTCGGTGGGCGAAGCCATTCGCCAGCCGGCGGAGTTGCTGGCCCGC GCGCTGCGCGATGCCTCGCCATATCACTGTGCGGCGCCGCGACAGGATCGATCGCAATGCCTGCGGCTGGTCGCGGTTAC CGCCTGTCCGACGGGGGTTGCGCATACCTTCATGGCGGCGGAGGCGCTGGAGGCAGAGGCGCGCCGTCGCGGCTGGCAGG TAAAGGTGGAGACGCGGGGATCGGTAGGGGCAGGCAACGCTATCACGCCGCAGGAGGTCGCGGAGGCCGATCTGGTGGTG GTGGCGGCGGATATTGAGGTGGATCTGGCAAAGTTCGCCGGTAAACCGATGTACCGCACCAGCACAGGCCTGGCGCTGAA GAAGACGTCTCAGGAGCTGGACAGGGCGCTGCAGGAAGCGGAGATATATCGCCCTCAGACATCGGCGCCGTCCGGGGCCG CGGCATCGGGGCGCCGGAAAGAGGCGGGCGGTGCGTACCGTCACCTGCTGACCGGCGTCTCCTACATGTTGCCGATGGTG GTGGCCGGCGGCCTGTGTATCGCGCTTTCGTTCGTCTTTGGTATTCAGGCCTTCAAGGAGCCTGGCACATTGGCGGCCGC GCTGATGCAGATCGGCGGCGGCACCGCTTTTGCGTTGATGGTGCCGGTGCTGGCGGGTTATATCGCCTTCTCCATCGCCG ATCGCCCCGGTCTGACGCCGGGACTGATCGGCGGGATGCTGGCGGTTAGCCTGGGCTCGGGCTTTATCGGCGGGATCATC GCCGGCTTTCTCGCCGGCTATGTTGCCCGGGCCATCAGCAGCAGGCTGACTCTGCCTGCGAGCATGGAGGCACTTAAGCC GATCCTGATCATTCCGCTGCTGTCGAGCCTGATCGTCGGCCTGGCGATGATTTACATCATCGGTACGCCGGTGGCGAAGC TCCTGGCCTGGCTGACCCACTGGCTGCAGACCATGGGCACGGCTAATGCGGTGATCCTGGGGGCGGTACTTGGCGCGATG ATGTGTACCGACATGGGCGGACCGGTGAATAAGGCGGCCTATGCTTTCGGTGTAGGTCTGCTCAGTACCCAGACTTACGG TCCCATGGCGGCCATCATGGCCGCCGGGATGGTTCCGCCGCTGGCGATGGGGCTGGCGACGCTGGTCGCGCGCCGCAAGT TTGCCCAGAGCGAGCGTGAGGGCGGTAAGGCGGCCGTGGTGCTGGGGCTGTGCTTCATCACCGAAGGGGCGATCCCCTTT GCCGCACGGGATCCGATGCGGGTACTGCCGTGCTGCATTTTGGGCGGGGCGCTGACCGGGGCGCTGTCGATGCTGTTTGG CGCGAAGCTGATGGCGCCGCACGGCGGACTGTTTGTTCTGCTGATCCCCGGCGCGATCAGCCCGGTAGTGCCTTATCTGC TGGCGATCTTGGCCGGAACGCTGCTGAGTGGGCTGTTGTATGCGCTGCTCAAGCGTCCAGATGTTGCACCACAGGAGCGG GTGACGAAAACGGCATAG
Upstream 100 bases:
>100_bases CGGTCAGTCAGAGCAATGTCGGCATCAGCGACCGCACGCAGCTGGCGGCGATGATGGCACGCGTGGAGCTCGATCCTTTT AACTGATTGTGGAAGGTCAT
Downstream 100 bases:
>100_bases TCATTTGAATGATAGCGTGTGGGGGAGCCGGGAGGCTCCCCTATTTTTTTAGGCGGCCTCGTCACAGGAAAGCGCCGGGG GACGCTGGGTGAAACGCCAG
Product: PTS system fructose-specific transporter subunits IIBC
Products: NA
Alternate protein names: EIIBC-Fru; Fructose-specific phosphotransferase enzyme IIB component; EIII-Fru; PTS system fructose-specific EIIB component; Fructose permease IIC component; PTS system fructose-specific EIIC component [H]
Number of amino acids: Translated: 565; Mature: 565
Protein sequence:
>565_residues MNTLLITEGAQGEARCFLARRMLEAVAAQQQITWVTRPQDAALVLFIGDDTPQDAALEGKPLYRGSVGEAIRQPAELLAR ALRDASPYHCAAPRQDRSQCLRLVAVTACPTGVAHTFMAAEALEAEARRRGWQVKVETRGSVGAGNAITPQEVAEADLVV VAADIEVDLAKFAGKPMYRTSTGLALKKTSQELDRALQEAEIYRPQTSAPSGAAASGRRKEAGGAYRHLLTGVSYMLPMV VAGGLCIALSFVFGIQAFKEPGTLAAALMQIGGGTAFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSLGSGFIGGII AGFLAGYVARAISSRLTLPASMEALKPILIIPLLSSLIVGLAMIYIIGTPVAKLLAWLTHWLQTMGTANAVILGAVLGAM MCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATLVARRKFAQSEREGGKAAVVLGLCFITEGAIPF AARDPMRVLPCCILGGALTGALSMLFGAKLMAPHGGLFVLLIPGAISPVVPYLLAILAGTLLSGLLYALLKRPDVAPQER VTKTA
Sequences:
>Translated_565_residues MNTLLITEGAQGEARCFLARRMLEAVAAQQQITWVTRPQDAALVLFIGDDTPQDAALEGKPLYRGSVGEAIRQPAELLAR ALRDASPYHCAAPRQDRSQCLRLVAVTACPTGVAHTFMAAEALEAEARRRGWQVKVETRGSVGAGNAITPQEVAEADLVV VAADIEVDLAKFAGKPMYRTSTGLALKKTSQELDRALQEAEIYRPQTSAPSGAAASGRRKEAGGAYRHLLTGVSYMLPMV VAGGLCIALSFVFGIQAFKEPGTLAAALMQIGGGTAFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSLGSGFIGGII AGFLAGYVARAISSRLTLPASMEALKPILIIPLLSSLIVGLAMIYIIGTPVAKLLAWLTHWLQTMGTANAVILGAVLGAM MCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATLVARRKFAQSEREGGKAAVVLGLCFITEGAIPF AARDPMRVLPCCILGGALTGALSMLFGAKLMAPHGGLFVLLIPGAISPVVPYLLAILAGTLLSGLLYALLKRPDVAPQER VTKTA >Mature_565_residues MNTLLITEGAQGEARCFLARRMLEAVAAQQQITWVTRPQDAALVLFIGDDTPQDAALEGKPLYRGSVGEAIRQPAELLAR ALRDASPYHCAAPRQDRSQCLRLVAVTACPTGVAHTFMAAEALEAEARRRGWQVKVETRGSVGAGNAITPQEVAEADLVV VAADIEVDLAKFAGKPMYRTSTGLALKKTSQELDRALQEAEIYRPQTSAPSGAAASGRRKEAGGAYRHLLTGVSYMLPMV VAGGLCIALSFVFGIQAFKEPGTLAAALMQIGGGTAFALMVPVLAGYIAFSIADRPGLTPGLIGGMLAVSLGSGFIGGII AGFLAGYVARAISSRLTLPASMEALKPILIIPLLSSLIVGLAMIYIIGTPVAKLLAWLTHWLQTMGTANAVILGAVLGAM MCTDMGGPVNKAAYAFGVGLLSTQTYGPMAAIMAAGMVPPLAMGLATLVARRKFAQSEREGGKAAVVLGLCFITEGAIPF AARDPMRVLPCCILGGALTGALSMLFGAKLMAPHGGLFVLLIPGAISPVVPYLLAILAGTLLSGLLYALLKRPDVAPQER VTKTA
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1299
COG function: function code G; Phosphotransferase system, fructose-specific IIC component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1788492, Length=558, Percent_Identity=73.8351254480287, Blast_Score=817, Evalue=0.0, Organism=Escherichia coli, GI1786951, Length=501, Percent_Identity=34.9301397205589, Blast_Score=262, Evalue=5e-71, Organism=Escherichia coli, GI87082348, Length=489, Percent_Identity=33.3333333333333, Blast_Score=247, Evalue=1e-66, Organism=Escherichia coli, GI1790386, Length=300, Percent_Identity=43, Blast_Score=207, Evalue=1e-54, Organism=Escherichia coli, GI1788729, Length=403, Percent_Identity=28.0397022332506, Blast_Score=124, Evalue=2e-29, Organism=Escherichia coli, GI1790387, Length=108, Percent_Identity=45.3703703703704, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1788730, Length=91, Percent_Identity=41.7582417582418, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1790390, Length=65, Percent_Identity=46.1538461538462, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013011 - InterPro: IPR003501 - InterPro: IPR003352 - InterPro: IPR013014 - InterPro: IPR003353 - InterPro: IPR006327 [H]
Pfam domain/function: PF02378 PTS_EIIC; PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 58748; Mature: 58748
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS51099 PTS_EIIB_TYPE_2 ; PS51104 PTS_EIIC_TYPE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLLITEGAQGEARCFLARRMLEAVAAQQQITWVTRPQDAALVLFIGDDTPQDAALEGK CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCCCCCCCCC PLYRGSVGEAIRQPAELLARALRDASPYHCAAPRQDRSQCLRLVAVTACPTGVAHTFMAA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH EALEAEARRRGWQVKVETRGSVGAGNAITPQEVAEADLVVVAADIEVDLAKFAGKPMYRT HHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHCCCCEEEEEECCHHHHHHHCCCCCEEC STGLALKKTSQELDRALQEAEIYRPQTSAPSGAAASGRRKEAGGAYRHLLTGVSYMLPMV CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VAGGLCIALSFVFGIQAFKEPGTLAAALMQIGGGTAFALMVPVLAGYIAFSIADRPGLTP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCH GLIGGMLAVSLGSGFIGGIIAGFLAGYVARAISSRLTLPASMEALKPILIIPLLSSLIVG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LAMIYIIGTPVAKLLAWLTHWLQTMGTANAVILGAVLGAMMCTDMGGPVNKAAYAFGVGL HHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LSTQTYGPMAAIMAAGMVPPLAMGLATLVARRKFAQSEREGGKAAVVLGLCFITEGAIPF HCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCC AARDPMRVLPCCILGGALTGALSMLFGAKLMAPHGGLFVLLIPGAISPVVPYLLAILAGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHH LLSGLLYALLKRPDVAPQERVTKTA HHHHHHHHHHHCCCCCCHHHHCCCC >Mature Secondary Structure MNTLLITEGAQGEARCFLARRMLEAVAAQQQITWVTRPQDAALVLFIGDDTPQDAALEGK CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEEEECCCCCCCCCCCCC PLYRGSVGEAIRQPAELLARALRDASPYHCAAPRQDRSQCLRLVAVTACPTGVAHTFMAA CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH EALEAEARRRGWQVKVETRGSVGAGNAITPQEVAEADLVVVAADIEVDLAKFAGKPMYRT HHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHCCCCEEEEEECCHHHHHHHCCCCCEEC STGLALKKTSQELDRALQEAEIYRPQTSAPSGAAASGRRKEAGGAYRHLLTGVSYMLPMV CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH VAGGLCIALSFVFGIQAFKEPGTLAAALMQIGGGTAFALMVPVLAGYIAFSIADRPGLTP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCH GLIGGMLAVSLGSGFIGGIIAGFLAGYVARAISSRLTLPASMEALKPILIIPLLSSLIVG HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH LAMIYIIGTPVAKLLAWLTHWLQTMGTANAVILGAVLGAMMCTDMGGPVNKAAYAFGVGL HHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LSTQTYGPMAAIMAAGMVPPLAMGLATLVARRKFAQSEREGGKAAVVLGLCFITEGAIPF HCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCC AARDPMRVLPCCILGGALTGALSMLFGAKLMAPHGGLFVLLIPGAISPVVPYLLAILAGT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHH LLSGLLYALLKRPDVAPQERVTKTA HHHHHHHHHHHCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3076173; 9278503; 9097040; 1981619 [H]