Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920425

Identifier: 238920425

GI number: 238920425

Start: 2434133

End: 2435485

Strand: Direct

Name: 238920425

Synonym: NT01EI_2536

Alternate gene names: NA

Gene position: 2434133-2435485 (Clockwise)

Preceding gene: 238920424

Following gene: 238920427

Centisome position: 63.85

GC content: 35.4

Gene sequence:

>1353_bases
ATGCCCTTGCACAAAGTTGAAACACCGTCTTCTCAGTCACTTTCTCGAGTCCCATCTATTAGTAAACTCACTAATGAATC
ATTAGGAAAATTAACTAACAGACGTGATGTTGTGTTAATTAATCCAATCTGTGGTGGTTCTGGGGATATTTCTTTAGCTA
ATAAGATTGCAAATCTTGCTTTAGAACAAGACTGCCGGATAACCATTGTTCCTGTTGATTGCACTTTGTTTGGTGACCCT
ACATTCAATAATAATCACCGTAATATTTCACATTGCTCCGTAGAGCACAGTATAGGTGATTTTTATGATCCGATTTTTGT
CGTTGCACCTGCAGCCATATGCTCACCAGCGAAGCTTCATGATATTATTGAAAGTTTGTGCCATGAATATCATCTTAATA
AAGATGATGTTGCTTGTATTGAAGAGATGGATTTTATTTCTCCTGATAATGCCAGAGTTCTTGAACGCGAGGATATGTTT
AAAAAAAGCGGCTTTAATAAAAGCATGTATTATTCATTAGGGTTTTCGGAGGGGGCTATTGGCTATCTTCCCGTTGATAA
ACATACTGTCGATATTGTAAGGGAACGGTGTGAAAGGGACTTGGTTAATTTGCTTGATAGTTATAACTTTTCTTTAGAAA
AACAATCAAGATATAATATTGCTTATATTAGCTCACCAAATATATATAATGCAGTTCGTGTATTTGTCACTAACACACTA
TCTGAAAATCAAAGTGGTAACGCTAATTACATTATTGTTGTGAGATTATTGAATGAAAAAAATGAAGATAAATTAATTAA
ATATACAGAGGGGGTTTTATCTCATGGCGGAGATGATTATAATCCTCAAGATTTATTTTCATCAGCAAATATCTATGTTG
CCAAACCTGACGATGCAGAAAAACAAACAATCCATCATAAAGTTAATGTTGATGGGGAAGGAGGAGGTAGAATAAATATC
GTTTTTGTTAATTCACTACCTCAAAATATACTCTATGATTTTATGGCCCTTGCTGATTCAGGGATGGCTAGTGGTGACCA
ATCTTTAGGTGAGTTTTTATCATTGAATGGTCAAGTACCTTACTATGAAGTACAGCCATGGAAAGTTAATCTCGGTAATG
CTCTTGTGGCGCATGCTAAAGATATTGGTGGTGATGAATTGTCTGGTGTTATATCAAGCAGGATAGTGGGAATTAATGAT
CATATCCTTACGAGTGTTGAGAGGAATCGTGCAACTGAGCAGAGTGATGGATTGAAGGATTTTAACGAGAGAATTAGATC
CAGAACAGCTGATTCACAAATTTCAGAATTGTTCAAACCAAATAGAAAAGATGATGAAGATCTAATTAACTGA

Upstream 100 bases:

>100_bases
ATAAATGTTAATTTAATACTCATCTTTTCCATATTACATTTTTTGCAAATATTATTTACTATTCCCTTGATGTTTATTAT
TAAATAATGGTGCTATTTAC

Downstream 100 bases:

>100_bases
TCCTAATACCGCTACACTTTAACCAGTCTATGTTCCCCTCCGGGGAATGGGCTGACGGTATCCATAAAATGACGAACCTT
TTTTAACAGTTGCCACATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MPLHKVETPSSQSLSRVPSISKLTNESLGKLTNRRDVVLINPICGGSGDISLANKIANLALEQDCRITIVPVDCTLFGDP
TFNNNHRNISHCSVEHSIGDFYDPIFVVAPAAICSPAKLHDIIESLCHEYHLNKDDVACIEEMDFISPDNARVLEREDMF
KKSGFNKSMYYSLGFSEGAIGYLPVDKHTVDIVRERCERDLVNLLDSYNFSLEKQSRYNIAYISSPNIYNAVRVFVTNTL
SENQSGNANYIIVVRLLNEKNEDKLIKYTEGVLSHGGDDYNPQDLFSSANIYVAKPDDAEKQTIHHKVNVDGEGGGRINI
VFVNSLPQNILYDFMALADSGMASGDQSLGEFLSLNGQVPYYEVQPWKVNLGNALVAHAKDIGGDELSGVISSRIVGIND
HILTSVERNRATEQSDGLKDFNERIRSRTADSQISELFKPNRKDDEDLIN

Sequences:

>Translated_450_residues
MPLHKVETPSSQSLSRVPSISKLTNESLGKLTNRRDVVLINPICGGSGDISLANKIANLALEQDCRITIVPVDCTLFGDP
TFNNNHRNISHCSVEHSIGDFYDPIFVVAPAAICSPAKLHDIIESLCHEYHLNKDDVACIEEMDFISPDNARVLEREDMF
KKSGFNKSMYYSLGFSEGAIGYLPVDKHTVDIVRERCERDLVNLLDSYNFSLEKQSRYNIAYISSPNIYNAVRVFVTNTL
SENQSGNANYIIVVRLLNEKNEDKLIKYTEGVLSHGGDDYNPQDLFSSANIYVAKPDDAEKQTIHHKVNVDGEGGGRINI
VFVNSLPQNILYDFMALADSGMASGDQSLGEFLSLNGQVPYYEVQPWKVNLGNALVAHAKDIGGDELSGVISSRIVGIND
HILTSVERNRATEQSDGLKDFNERIRSRTADSQISELFKPNRKDDEDLIN
>Mature_449_residues
PLHKVETPSSQSLSRVPSISKLTNESLGKLTNRRDVVLINPICGGSGDISLANKIANLALEQDCRITIVPVDCTLFGDPT
FNNNHRNISHCSVEHSIGDFYDPIFVVAPAAICSPAKLHDIIESLCHEYHLNKDDVACIEEMDFISPDNARVLEREDMFK
KSGFNKSMYYSLGFSEGAIGYLPVDKHTVDIVRERCERDLVNLLDSYNFSLEKQSRYNIAYISSPNIYNAVRVFVTNTLS
ENQSGNANYIIVVRLLNEKNEDKLIKYTEGVLSHGGDDYNPQDLFSSANIYVAKPDDAEKQTIHHKVNVDGEGGGRINIV
FVNSLPQNILYDFMALADSGMASGDQSLGEFLSLNGQVPYYEVQPWKVNLGNALVAHAKDIGGDELSGVISSRIVGINDH
ILTSVERNRATEQSDGLKDFNERIRSRTADSQISELFKPNRKDDEDLIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50066; Mature: 49934

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLHKVETPSSQSLSRVPSISKLTNESLGKLTNRRDVVLINPICGGSGDISLANKIANLA
CCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHH
LEQDCRITIVPVDCTLFGDPTFNNNHRNISHCSVEHSIGDFYDPIFVVAPAAICSPAKLH
CCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHCCHHHHCCHHHCCHHHHH
DIIESLCHEYHLNKDDVACIEEMDFISPDNARVLEREDMFKKSGFNKSMYYSLGFSEGAI
HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCEEEEEECCCCCCE
GYLPVDKHTVDIVRERCERDLVNLLDSYNFSLEKQSRYNIAYISSPNIYNAVRVFVTNTL
EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCHHHHHEEEEEHHH
SENQSGNANYIIVVRLLNEKNEDKLIKYTEGVLSHGGDDYNPQDLFSSANIYVAKPDDAE
CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEECCCCCC
KQTIHHKVNVDGEGGGRINIVFVNSLPQNILYDFMALADSGMASGDQSLGEFLSLNGQVP
HHHEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
YYEVQPWKVNLGNALVAHAKDIGGDELSGVISSRIVGINDHILTSVERNRATEQSDGLKD
EEEECCEEEECCCEEEHHHHHCCCHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCCCHHH
FNERIRSRTADSQISELFKPNRKDDEDLIN
HHHHHHHCCHHHHHHHHHCCCCCCHHHHCC
>Mature Secondary Structure 
PLHKVETPSSQSLSRVPSISKLTNESLGKLTNRRDVVLINPICGGSGDISLANKIANLA
CCCCCCCCCCHHHHHCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHH
LEQDCRITIVPVDCTLFGDPTFNNNHRNISHCSVEHSIGDFYDPIFVVAPAAICSPAKLH
CCCCCEEEEEEEEEEEECCCCCCCCCCCCCEEEEHHHHHHHHCCHHHHCCHHHCCHHHHH
DIIESLCHEYHLNKDDVACIEEMDFISPDNARVLEREDMFKKSGFNKSMYYSLGFSEGAI
HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCEEHHHHHHHHHCCCCCEEEEEECCCCCCE
GYLPVDKHTVDIVRERCERDLVNLLDSYNFSLEKQSRYNIAYISSPNIYNAVRVFVTNTL
EEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEECCCCHHHHHEEEEEHHH
SENQSGNANYIIVVRLLNEKNEDKLIKYTEGVLSHGGDDYNPQDLFSSANIYVAKPDDAE
CCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCEEEECCCCCC
KQTIHHKVNVDGEGGGRINIVFVNSLPQNILYDFMALADSGMASGDQSLGEFLSLNGQVP
HHHEEEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC
YYEVQPWKVNLGNALVAHAKDIGGDELSGVISSRIVGINDHILTSVERNRATEQSDGLKD
EEEECCEEEECCCEEEHHHHHCCCHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCCCHHH
FNERIRSRTADSQISELFKPNRKDDEDLIN
HHHHHHHCCHHHHHHHHHCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA