| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920424
Identifier: 238920424
GI number: 238920424
Start: 2433952
End: 2434119
Strand: Direct
Name: 238920424
Synonym: NT01EI_2535
Alternate gene names: NA
Gene position: 2433952-2434119 (Clockwise)
Preceding gene: 238920420
Following gene: 238920425
Centisome position: 63.84
GC content: 23.21
Gene sequence:
>168_bases ATGACTTTGAGGTGTCTGTTAAACCCATGTCTATTCAATCGGTTAAAATTAAGATCCGAAAAACAAAAGAAAAATAGTTA TATAAATGTTAATTTAATACTCATCTTTTCCATATTACATTTTTTGCAAATATTATTTACTATTCCCTTGATGTTTATTA TTAAATAA
Upstream 100 bases:
>100_bases CTATTCCGCGCAGCTATTTAGGAGGCGTTAGTCCGTAGGCCTTTGAACGGGCCTCGTCGTGAGGACAGAATTTGTCTATG GTTTTGTGATCAGTCCATAA
Downstream 100 bases:
>100_bases TGGTGCTATTTACATGCCCTTGCACAAAGTTGAAACACCGTCTTCTCAGTCACTTTCTCGAGTCCCATCTATTAGTAAAC TCACTAATGAATCATTAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MTLRCLLNPCLFNRLKLRSEKQKKNSYINVNLILIFSILHFLQILFTIPLMFIIK
Sequences:
>Translated_55_residues MTLRCLLNPCLFNRLKLRSEKQKKNSYINVNLILIFSILHFLQILFTIPLMFIIK >Mature_54_residues TLRCLLNPCLFNRLKLRSEKQKKNSYINVNLILIFSILHFLQILFTIPLMFIIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6608; Mature: 6477
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRCLLNPCLFNRLKLRSEKQKKNSYINVNLILIFSILHFLQILFTIPLMFIIK CCHHHHHCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TLRCLLNPCLFNRLKLRSEKQKKNSYINVNLILIFSILHFLQILFTIPLMFIIK CHHHHHCHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA