| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is hflD
Identifier: 238920211
GI number: 238920211
Start: 2217891
End: 2218517
Strand: Direct
Name: hflD
Synonym: NT01EI_2320
Alternate gene names: 238920211
Gene position: 2217891-2218517 (Clockwise)
Preceding gene: 238920210
Following gene: 238920212
Centisome position: 58.18
GC content: 62.52
Gene sequence:
>627_bases GTGGCGAAGAATTACTATGACATCACTCTGGCGCTGGCCGGTATCTGTCAGTCAGCGCGTCTGGTTCAGCAGCTGGCCCA TGACGGGCAATGCGACAATGTTGCGCTGCGTACCTCGCTGAGCAGTATTCTTCAAACCGATCCGCCGAATACCCTGGCCG TCTTCGGCGACCATGAGCGCGTGCTGAAGCCGGGTCTGGAGACCCTGCTCAACGTCCTGAACGCTAACCGCCAGGGGCCG GGCGCAGAGCTGACCCGCTACTGCCTCAGCCTGATGCTGCTGGAGCGTAAGCTGTTCGGCCACCCGCAGGCCCTGCGTAC CCTCTCAGAGCGTATCGGTGAGCTCGATCGCCAGCTGGCACACTTCGATCTGGAGTCCGACACCATCGTCAGCGCGCTGG CCGCCATCTATGTGGATGTGATCAGCCCGCTGGGGCCGCGGATTCAGGTCACCGGCTCTCCCGCCGTACTGCAAAATGCC CTGGTACAGGCGCGGGTGCGCGCCGCGCTGCTGGCAGGGATCCGCGCCGGGATCCTGTGGCAACAGGTCGGCGGCAGCCG GCTGCAGCTGATGTTCTCCCGTAATCGCCTATTTCAGATGGCGCAGAATTTATTGACCCACAGTTAA
Upstream 100 bases:
>100_bases GCCGCTAGGTTTAACGTCACGTTTATGGCATGATCGTGGGTCAGAATCTGACACCGATGCCGCGGCGCCGGTGTTTCGCT GCCCGCAAACAGGAGTCCAC
Downstream 100 bases:
>100_bases CCTTTCCCAATCCCAGGAGTTGCTACCGATGGAATTATCCTCCCTGACCGCCGTATCCCCAATCGACGGCCGCTACGGCG AGAAAGTCAGTGCCCTGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MAKNYYDITLALAGICQSARLVQQLAHDGQCDNVALRTSLSSILQTDPPNTLAVFGDHERVLKPGLETLLNVLNANRQGP GAELTRYCLSLMLLERKLFGHPQALRTLSERIGELDRQLAHFDLESDTIVSALAAIYVDVISPLGPRIQVTGSPAVLQNA LVQARVRAALLAGIRAGILWQQVGGSRLQLMFSRNRLFQMAQNLLTHS
Sequences:
>Translated_208_residues MAKNYYDITLALAGICQSARLVQQLAHDGQCDNVALRTSLSSILQTDPPNTLAVFGDHERVLKPGLETLLNVLNANRQGP GAELTRYCLSLMLLERKLFGHPQALRTLSERIGELDRQLAHFDLESDTIVSALAAIYVDVISPLGPRIQVTGSPAVLQNA LVQARVRAALLAGIRAGILWQQVGGSRLQLMFSRNRLFQMAQNLLTHS >Mature_207_residues AKNYYDITLALAGICQSARLVQQLAHDGQCDNVALRTSLSSILQTDPPNTLAVFGDHERVLKPGLETLLNVLNANRQGPG AELTRYCLSLMLLERKLFGHPQALRTLSERIGELDRQLAHFDLESDTIVSALAAIYVDVISPLGPRIQVTGSPAVLQNAL VQARVRAALLAGIRAGILWQQVGGSRLQLMFSRNRLFQMAQNLLTHS
Specific function: Unknown
COG id: COG2915
COG function: function code R; Uncharacterized protein involved in purine metabolism
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hflD family
Homologues:
Organism=Escherichia coli, GI1787377, Length=208, Percent_Identity=71.6346153846154, Blast_Score=285, Evalue=1e-78,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HFLD_EDWI9 (C5B8C1)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002933726.1 - ProteinModelPortal: C5B8C1 - GeneID: 7960496 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_2320 - OMA: ANFAGIY - ProtClustDB: PRK00218 - GO: GO:0005737 - HAMAP: MF_00695 - InterPro: IPR007451 - ProDom: PD037115
Pfam domain/function: PF04356 DUF489; SSF101322 DUF489
EC number: NA
Molecular weight: Translated: 22790; Mature: 22659
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNYYDITLALAGICQSARLVQQLAHDGQCDNVALRTSLSSILQTDPPNTLAVFGDHER CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHH VLKPGLETLLNVLNANRQGPGAELTRYCLSLMLLERKLFGHPQALRTLSERIGELDRQLA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH HFDLESDTIVSALAAIYVDVISPLGPRIQVTGSPAVLQNALVQARVRAALLAGIRAGILW HCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QQVGGSRLQLMFSRNRLFQMAQNLLTHS HHHCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKNYYDITLALAGICQSARLVQQLAHDGQCDNVALRTSLSSILQTDPPNTLAVFGDHER CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHH VLKPGLETLLNVLNANRQGPGAELTRYCLSLMLLERKLFGHPQALRTLSERIGELDRQLA HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH HFDLESDTIVSALAAIYVDVISPLGPRIQVTGSPAVLQNALVQARVRAALLAGIRAGILW HCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QQVGGSRLQLMFSRNRLFQMAQNLLTHS HHHCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA