Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238920144

Identifier: 238920144

GI number: 238920144

Start: 2160029

End: 2160685

Strand: Reverse

Name: 238920144

Synonym: NT01EI_2250

Alternate gene names: NA

Gene position: 2160685-2160029 (Counterclockwise)

Preceding gene: 238920145

Following gene: 238920136

Centisome position: 56.68

GC content: 34.25

Gene sequence:

>657_bases
ATGGAAAATGTAGACACTATATTAAATAAGTATGTTTCAAATCGACATCTTTTTGAACATTTTATGAATGGTGTTGTTGA
TACTTTTAGACTAGACCCTAGTTTAAATGATTATCATCACCCTGTCATTCATACTATAAAAAGCAGGTTGAAGGATGTTG
ACCATTTAAGAGATAAGATTGAGAGAAAAAATAGCAGTGACGCCCCGATCTCTGAGGAGAATGTATTTTATCGGGTAACT
GATCTTGCTGGTGTTCGCATATTACATCTTTATCAAGATCAACTAAAAAATATTCATGAATTAATACAGAAAAAAGTAGA
TGATGGTGATTGGTTTTACAGAGAAAGTCCTATCGCGTATTCATGGGATCCTGAAAGTTGTGACTTCTTTACGTCGTTAG
GTCTTACGCCAAAAATCAAAGAGTCTTATTATACAAGCATTCATTATGTTATTAAGCCAAAGACTGATTCAAATATTTGT
TGTGAGATTCAGGTGAGAACTCTTTTTGAGGAAATTTGGGGTGAGATTGATCATACAATAAATTACCCTCACCCAACTGA
GAATTTCGCGTGTAAAGAACAATTGCGAGTGTTATCTAAACTTGTATCAACCGGTACTAGGTTGGCTGACTCTATTTTTA
GAGTTAAGGGACAATAG

Upstream 100 bases:

>100_bases
CTTTGAGAGGGTCAAAGTCAAAATACATTGCCACCAAGAAAAGCTATGAAGCTTTTACCAAAGATTTGATTGCAAGAATA
TCTATGCTCGGTAATTAATT

Downstream 100 bases:

>100_bases
TAGTTGATAGGCTGGCTGTTTGTTTTGGCTAGCCTATGTAGTTAGCATCCTCTGGTTAAATAGTTTGGATATTAATTGGT
CGGTTTTGATGGCGCTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: RelA/SpoT Domain-Containing Protein; RelA/SpoT Domain Protein; GTP Pyrophosphokinase-Like Protein; RelA / SpoT Related Protein

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MENVDTILNKYVSNRHLFEHFMNGVVDTFRLDPSLNDYHHPVIHTIKSRLKDVDHLRDKIERKNSSDAPISEENVFYRVT
DLAGVRILHLYQDQLKNIHELIQKKVDDGDWFYRESPIAYSWDPESCDFFTSLGLTPKIKESYYTSIHYVIKPKTDSNIC
CEIQVRTLFEEIWGEIDHTINYPHPTENFACKEQLRVLSKLVSTGTRLADSIFRVKGQ

Sequences:

>Translated_218_residues
MENVDTILNKYVSNRHLFEHFMNGVVDTFRLDPSLNDYHHPVIHTIKSRLKDVDHLRDKIERKNSSDAPISEENVFYRVT
DLAGVRILHLYQDQLKNIHELIQKKVDDGDWFYRESPIAYSWDPESCDFFTSLGLTPKIKESYYTSIHYVIKPKTDSNIC
CEIQVRTLFEEIWGEIDHTINYPHPTENFACKEQLRVLSKLVSTGTRLADSIFRVKGQ
>Mature_218_residues
MENVDTILNKYVSNRHLFEHFMNGVVDTFRLDPSLNDYHHPVIHTIKSRLKDVDHLRDKIERKNSSDAPISEENVFYRVT
DLAGVRILHLYQDQLKNIHELIQKKVDDGDWFYRESPIAYSWDPESCDFFTSLGLTPKIKESYYTSIHYVIKPKTDSNIC
CEIQVRTLFEEIWGEIDHTINYPHPTENFACKEQLRVLSKLVSTGTRLADSIFRVKGQ

Specific function: Unknown

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25590; Mature: 25590

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENVDTILNKYVSNRHLFEHFMNGVVDTFRLDPSLNDYHHPVIHTIKSRLKDVDHLRDKI
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ERKNSSDAPISEENVFYRVTDLAGVRILHLYQDQLKNIHELIQKKVDDGDWFYRESPIAY
HHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEE
SWDPESCDFFTSLGLTPKIKESYYTSIHYVIKPKTDSNICCEIQVRTLFEEIWGEIDHTI
CCCCCCCHHHHHCCCCHHHHHHHHCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCC
NYPHPTENFACKEQLRVLSKLVSTGTRLADSIFRVKGQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MENVDTILNKYVSNRHLFEHFMNGVVDTFRLDPSLNDYHHPVIHTIKSRLKDVDHLRDKI
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ERKNSSDAPISEENVFYRVTDLAGVRILHLYQDQLKNIHELIQKKVDDGDWFYRESPIAY
HHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEE
SWDPESCDFFTSLGLTPKIKESYYTSIHYVIKPKTDSNICCEIQVRTLFEEIWGEIDHTI
CCCCCCCHHHHHCCCCHHHHHHHHCEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHCCC
NYPHPTENFACKEQLRVLSKLVSTGTRLADSIFRVKGQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA