| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920136
Identifier: 238920136
GI number: 238920136
Start: 2154003
End: 2154284
Strand: Reverse
Name: 238920136
Synonym: NT01EI_2242
Alternate gene names: NA
Gene position: 2154284-2154003 (Counterclockwise)
Preceding gene: 238920144
Following gene: 238920132
Centisome position: 56.51
GC content: 40.07
Gene sequence:
>282_bases ATGAGTCAGGTTAAAATTTATGTGTTCCAGGCGGCTGATAATAAATTTTATTGGGAAGCCCACCCAAATGTCCCCAGCCT TTCTGGTGGTCCCTTTGAAACCCAGCCTTCGGCCATTAAAAACCTTGAGGCTGTCATTTTATCTTCCGCAATTTATAATA TTAAGATTGTGAACTTCGCTGGTATTAAAATGCCAAATATGTATTTCCCCGTGATTTTGCAAATAAATATGATATCGGCG ACGATCACCCGTCTTATCAGTTTCTCAAGAACCGTGACTTAG
Upstream 100 bases:
>100_bases TATAACGCGCCCGGCCGCGTCGTGGTAAGCCTCGTTAGGCCTGCAGTCCTGCTTAGACGTTGGCAGGCGTAACGTTCAAC ACCACAAGGAGAGGTGCAAT
Downstream 100 bases:
>100_bases ACTAAGGTAAAGATTGGCTTACTCTTTTTTTATCGGGTCAGGTATTAATGGCGGAAGCTTAGGGTCCGCCATTTCAGCCG TAACTATAAATGGAATGATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 92
Protein sequence:
>93_residues MSQVKIYVFQAADNKFYWEAHPNVPSLSGGPFETQPSAIKNLEAVILSSAIYNIKIVNFAGIKMPNMYFPVILQINMISA TITRLISFSRTVT
Sequences:
>Translated_93_residues MSQVKIYVFQAADNKFYWEAHPNVPSLSGGPFETQPSAIKNLEAVILSSAIYNIKIVNFAGIKMPNMYFPVILQINMISA TITRLISFSRTVT >Mature_92_residues SQVKIYVFQAADNKFYWEAHPNVPSLSGGPFETQPSAIKNLEAVILSSAIYNIKIVNFAGIKMPNMYFPVILQINMISAT ITRLISFSRTVT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10398; Mature: 10267
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVKIYVFQAADNKFYWEAHPNVPSLSGGPFETQPSAIKNLEAVILSSAIYNIKIVNFA CCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEC GIKMPNMYFPVILQINMISATITRLISFSRTVT CCCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCC >Mature Secondary Structure SQVKIYVFQAADNKFYWEAHPNVPSLSGGPFETQPSAIKNLEAVILSSAIYNIKIVNFA CCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEEEEEEC GIKMPNMYFPVILQINMISATITRLISFSRTVT CCCCCCCEEEEEEEEEHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA