| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238920145
Identifier: 238920145
GI number: 238920145
Start: 2160688
End: 2161695
Strand: Reverse
Name: 238920145
Synonym: NT01EI_2251
Alternate gene names: NA
Gene position: 2161695-2160688 (Counterclockwise)
Preceding gene: 238920147
Following gene: 238920144
Centisome position: 56.7
GC content: 33.83
Gene sequence:
>1008_bases ATGATTGATGCTGATCCTCAGTGTAATTTAACTATTTATTCTTTAAAGCAAGAAAAAATACAGAGGCTATGGGAGGTAGA GAATGATTTTATAGACTCAGGCTTTGACTCGGCAAAAAAGAAATTATCAGCAGAAGACTTTAACATCATATCAAATGAAC CAAGAAGCCTTCATTATATATTACAACCGACGCAAGAAGGTACTGGTGATCATAAGATTTTGCCTCCTCCTGTTAACTTG AGGGATAATCTTGATATTATTCCTGGGAGGCTAACGCTGCATTTGTATGAGGAGAAGATTGCTAGTAGGTGGAATGATTT ATATCGAGGAGAGCCTCTTGCAATTAGAACCATTTCCAGAATAAGAAAATTAGCTGAAGAATATAATGAACGTTATGGTT ATGATTACATTATAATTGATACGTCTCCTAGCTTAGGATCCTTGAATAAAGTAATCATATCTACAGTAGATGGATTTTTT ATACCTGCACTACCTGATTTATTTAGCCTTTATGGAATTAAAAATATTGGAAAATCTCTTTCCTCTTGGAAGAGGGAATT CGATGCAGTCTATCAACTTATATCATCAGAGAAAAGACATTCATTCCCTGAAAATTTTGTGAGATTTTTAGGTTATACAA TCTATAATGCAAGAAAATATGAAAATGGAAAAAGAAAATGGGATCTGGCTCAAGCGCATTTAAATTATGCTGAGCGTATC CCTAATACAATTGATCAGTTTATTATTAGTTCAATAAGAGGTAGCATTGACAATTCAGTCCTAGCTGAACCTATTGGTAA TACAGCAGTAATGTATAGTCATAATACATTTCCTTCAATGGCACAGTATTATAATCTGCCTATGTGGTTAGTTCCTGAAT ATCCTAATATAGAAAGCGAGCATGCAAATACTTTGAGAGGGTCAAAGTCAAAATACATTGCCACCAAGAAAAGCTATGAA GCTTTTACCAAAGATTTGATTGCAAGAATATCTATGCTCGGTAATTAA
Upstream 100 bases:
>100_bases GAAGATAATATCTGTCTTTAATAATAAGGGTGGTGTTGGTAAAACAACGCTCACTTTTCATATTGCGCAAAGCATGTGCG AGATGGGATATAGGGTATTA
Downstream 100 bases:
>100_bases TTATGGAAAATGTAGACACTATATTAAATAAGTATGTTTCAAATCGACATCTTTTTGAACATTTTATGAATGGTGTTGTT GATACTTTTAGACTAGACCC
Product: hypothetical protein
Products: NA
Alternate protein names: Cobyrinic Acid A C-Diamide Synthase; Phage-Related Regulatory Protein CII; Regulatory Protein CII; ParA Family Protein; Phage Regulatory Protein CII
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MIDADPQCNLTIYSLKQEKIQRLWEVENDFIDSGFDSAKKKLSAEDFNIISNEPRSLHYILQPTQEGTGDHKILPPPVNL RDNLDIIPGRLTLHLYEEKIASRWNDLYRGEPLAIRTISRIRKLAEEYNERYGYDYIIIDTSPSLGSLNKVIISTVDGFF IPALPDLFSLYGIKNIGKSLSSWKREFDAVYQLISSEKRHSFPENFVRFLGYTIYNARKYENGKRKWDLAQAHLNYAERI PNTIDQFIISSIRGSIDNSVLAEPIGNTAVMYSHNTFPSMAQYYNLPMWLVPEYPNIESEHANTLRGSKSKYIATKKSYE AFTKDLIARISMLGN
Sequences:
>Translated_335_residues MIDADPQCNLTIYSLKQEKIQRLWEVENDFIDSGFDSAKKKLSAEDFNIISNEPRSLHYILQPTQEGTGDHKILPPPVNL RDNLDIIPGRLTLHLYEEKIASRWNDLYRGEPLAIRTISRIRKLAEEYNERYGYDYIIIDTSPSLGSLNKVIISTVDGFF IPALPDLFSLYGIKNIGKSLSSWKREFDAVYQLISSEKRHSFPENFVRFLGYTIYNARKYENGKRKWDLAQAHLNYAERI PNTIDQFIISSIRGSIDNSVLAEPIGNTAVMYSHNTFPSMAQYYNLPMWLVPEYPNIESEHANTLRGSKSKYIATKKSYE AFTKDLIARISMLGN >Mature_335_residues MIDADPQCNLTIYSLKQEKIQRLWEVENDFIDSGFDSAKKKLSAEDFNIISNEPRSLHYILQPTQEGTGDHKILPPPVNL RDNLDIIPGRLTLHLYEEKIASRWNDLYRGEPLAIRTISRIRKLAEEYNERYGYDYIIIDTSPSLGSLNKVIISTVDGFF IPALPDLFSLYGIKNIGKSLSSWKREFDAVYQLISSEKRHSFPENFVRFLGYTIYNARKYENGKRKWDLAQAHLNYAERI PNTIDQFIISSIRGSIDNSVLAEPIGNTAVMYSHNTFPSMAQYYNLPMWLVPEYPNIESEHANTLRGSKSKYIATKKSYE AFTKDLIARISMLGN
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38595; Mature: 38595
Theoretical pI: Translated: 7.23; Mature: 7.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDADPQCNLTIYSLKQEKIQRLWEVENDFIDSGFDSAKKKLSAEDFNIISNEPRSLHYI CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHCCCCCCEEEEE LQPTQEGTGDHKILPPPVNLRDNLDIIPGRLTLHLYEEKIASRWNDLYRGEPLAIRTISR ECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHH IRKLAEEYNERYGYDYIIIDTSPSLGSLNKVIISTVDGFFIPALPDLFSLYGIKNIGKSL HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH SSWKREFDAVYQLISSEKRHSFPENFVRFLGYTIYNARKYENGKRKWDLAQAHLNYAERI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC PNTIDQFIISSIRGSIDNSVLAEPIGNTAVMYSHNTFPSMAQYYNLPMWLVPEYPNIESE CHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHCCCEEEECCCCCCCCH HANTLRGSKSKYIATKKSYEAFTKDLIARISMLGN HHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIDADPQCNLTIYSLKQEKIQRLWEVENDFIDSGFDSAKKKLSAEDFNIISNEPRSLHYI CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHCCCCCCEEEEE LQPTQEGTGDHKILPPPVNLRDNLDIIPGRLTLHLYEEKIASRWNDLYRGEPLAIRTISR ECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHH IRKLAEEYNERYGYDYIIIDTSPSLGSLNKVIISTVDGFFIPALPDLFSLYGIKNIGKSL HHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH SSWKREFDAVYQLISSEKRHSFPENFVRFLGYTIYNARKYENGKRKWDLAQAHLNYAERI HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC PNTIDQFIISSIRGSIDNSVLAEPIGNTAVMYSHNTFPSMAQYYNLPMWLVPEYPNIESE CHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCHHHHHHHCCCEEEECCCCCCCCH HANTLRGSKSKYIATKKSYEAFTKDLIARISMLGN HHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA