Definition Edwardsiella ictaluri 93-146 chromosome, complete genome.
Accession NC_012779
Length 3,812,315

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The map label for this gene is 238919917

Identifier: 238919917

GI number: 238919917

Start: 1948676

End: 1949458

Strand: Reverse

Name: 238919917

Synonym: NT01EI_2021

Alternate gene names: NA

Gene position: 1949458-1948676 (Counterclockwise)

Preceding gene: 238919921

Following gene: 238919916

Centisome position: 51.14

GC content: 57.98

Gene sequence:

>783_bases
ATGACCATCTCTCACGCCTCAAACATTACCCGCCCTCCCAAAGTGTCGATCCACGATGGCAGGGCGGTGACAACTACCGA
TGACGTCGCTGCCTATTTTGGTAAGCAAGCTCATCACGTCGTGCAAAAAGTAGAATCCCTTGATTGCTCAAAATATTTCA
CCATCCGCAACTTTTCGCGGATGGTGAAAAATAAAGCGATAGGCAGTGGTGCTGAGCGCCAAGTGGTCTACTACGAGATG
ACCAAAGACGGCTTCGTCTTTCTGGTCATGGGTTTCACCGGTAAGCGTGCCGCCGCGTTTAAAGAGGCCTATATCGCCGA
GTTCAACCGCATGGAGAGGCAACTGCTCACCCGCCAGCAGGGCGCGTACTCAGCCCCTAAGCCACAGCCGCTCTGCGACG
GGGAGATAAAAAACCTGAAATGGCTGATCGACTCCATCGTCAATCCGTTCCGGTTCCGCGCCGCCTGGAATCAGGGCGTC
TGGTACGCGCTGCGTCAGGCCACCGGCGTGCCATCCCCATATCCCTTTACCGCCGCCGATTTGCCTGCACTGGCCCGCGA
GCTGCAGCGCATCATGGAGATCAGCCATGAAACCCGCAGCCTGCTCCAGCAGCTTGAAAAGCAGGTGCTGCAGCAGGTGG
TGCGTAACCGCGGCGAACTCCGTCCGGTATTGAACCATATTCAGCATGAGTTCCGGCAGCTGAGTCTGTTGGGGGAGACC
CGCTCCCGGTTGAACAACGTCGAGCGGCAAAGCCTGGCCCGGCTGGAGCGGCGGGCAGGGTAG

Upstream 100 bases:

>100_bases
CAATACCAGCAATGGGAATAAGCCCGCTTGCCGCTTGTACAAGTTTCTAGCACTCGGCCACCCGAGCCATTCGGGTATCC
TCTAGAAAAGGATACAAGCT

Downstream 100 bases:

>100_bases
TTTGGAGCGCCCGGTGGGGAGGACTGCCGGGCGTGGTAGTAAATGAATAGGGTGATAATCATTTGAGTTTGGCTGTTTCA
TGCTTTAGTTTTAGATCTAG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 260; Mature: 259

Protein sequence:

>260_residues
MTISHASNITRPPKVSIHDGRAVTTTDDVAAYFGKQAHHVVQKVESLDCSKYFTIRNFSRMVKNKAIGSGAERQVVYYEM
TKDGFVFLVMGFTGKRAAAFKEAYIAEFNRMERQLLTRQQGAYSAPKPQPLCDGEIKNLKWLIDSIVNPFRFRAAWNQGV
WYALRQATGVPSPYPFTAADLPALARELQRIMEISHETRSLLQQLEKQVLQQVVRNRGELRPVLNHIQHEFRQLSLLGET
RSRLNNVERQSLARLERRAG

Sequences:

>Translated_260_residues
MTISHASNITRPPKVSIHDGRAVTTTDDVAAYFGKQAHHVVQKVESLDCSKYFTIRNFSRMVKNKAIGSGAERQVVYYEM
TKDGFVFLVMGFTGKRAAAFKEAYIAEFNRMERQLLTRQQGAYSAPKPQPLCDGEIKNLKWLIDSIVNPFRFRAAWNQGV
WYALRQATGVPSPYPFTAADLPALARELQRIMEISHETRSLLQQLEKQVLQQVVRNRGELRPVLNHIQHEFRQLSLLGET
RSRLNNVERQSLARLERRAG
>Mature_259_residues
TISHASNITRPPKVSIHDGRAVTTTDDVAAYFGKQAHHVVQKVESLDCSKYFTIRNFSRMVKNKAIGSGAERQVVYYEMT
KDGFVFLVMGFTGKRAAAFKEAYIAEFNRMERQLLTRQQGAYSAPKPQPLCDGEIKNLKWLIDSIVNPFRFRAAWNQGVW
YALRQATGVPSPYPFTAADLPALARELQRIMEISHETRSLLQQLEKQVLQQVVRNRGELRPVLNHIQHEFRQLSLLGETR
SRLNNVERQSLARLERRAG

Specific function: Unknown

COG id: COG3646

COG function: function code S; Uncharacterized phage-encoded protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29759; Mature: 29627

Theoretical pI: Translated: 10.57; Mature: 10.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISHASNITRPPKVSIHDGRAVTTTDDVAAYFGKQAHHVVQKVESLDCSKYFTIRNFSR
CCCCCCCCCCCCCCEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MVKNKAIGSGAERQVVYYEMTKDGFVFLVMGFTGKRAAAFKEAYIAEFNRMERQLLTRQQ
HHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GAYSAPKPQPLCDGEIKNLKWLIDSIVNPFRFRAAWNQGVWYALRQATGVPSPYPFTAAD
CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHH
LPALARELQRIMEISHETRSLLQQLEKQVLQQVVRNRGELRPVLNHIQHEFRQLSLLGET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RSRLNNVERQSLARLERRAG
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TISHASNITRPPKVSIHDGRAVTTTDDVAAYFGKQAHHVVQKVESLDCSKYFTIRNFSR
CCCCCCCCCCCCCEEEECCCEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
MVKNKAIGSGAERQVVYYEMTKDGFVFLVMGFTGKRAAAFKEAYIAEFNRMERQLLTRQQ
HHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
GAYSAPKPQPLCDGEIKNLKWLIDSIVNPFRFRAAWNQGVWYALRQATGVPSPYPFTAAD
CCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHH
LPALARELQRIMEISHETRSLLQQLEKQVLQQVVRNRGELRPVLNHIQHEFRQLSLLGET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
RSRLNNVERQSLARLERRAG
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA