| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919916
Identifier: 238919916
GI number: 238919916
Start: 1948039
End: 1948278
Strand: Reverse
Name: 238919916
Synonym: NT01EI_2020
Alternate gene names: NA
Gene position: 1948278-1948039 (Counterclockwise)
Preceding gene: 238919917
Following gene: 238919915
Centisome position: 51.1
GC content: 31.67
Gene sequence:
>240_bases ATGTTTTGTATGGCATATTTCTACCTTGCTCTTCTGTTTTTCTTTTTTTTGGATCATGTTTTTGGTTGGTCTATTTTTGA TGATGGCTATATTTCAAAAAACATTTTCTCTCTGGTTTTTTCATGTTTCTTGATTATAGCGTTTGTGGTTGTATCTATAG TGGCGGTTATTAGTCCAACAATGTGTATTTACAAGGTGAATAAAAAAGTGAAAAATCGATATGGATTTACAGGGCTCTGA
Upstream 100 bases:
>100_bases CAATATCAGCATTGTTAGCTCGCCTAACGCCACTAAAATACATTGGTTCTTAGCCAAGCAGCTTTATAGACGGTGCTTTA AAGATCAAGGTATGATTCGT
Downstream 100 bases:
>100_bases AAATATCGGGCGTTTTTAATGTTATTTAATTGATATTCCCATGCTTTTAAATAGGATAAACCAGACTCCCTCATGGAGGA TCGGGTTTATGCCTATCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 79; Mature: 79
Protein sequence:
>79_residues MFCMAYFYLALLFFFFLDHVFGWSIFDDGYISKNIFSLVFSCFLIIAFVVVSIVAVISPTMCIYKVNKKVKNRYGFTGL
Sequences:
>Translated_79_residues MFCMAYFYLALLFFFFLDHVFGWSIFDDGYISKNIFSLVFSCFLIIAFVVVSIVAVISPTMCIYKVNKKVKNRYGFTGL >Mature_79_residues MFCMAYFYLALLFFFFLDHVFGWSIFDDGYISKNIFSLVFSCFLIIAFVVVSIVAVISPTMCIYKVNKKVKNRYGFTGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9182; Mature: 9182
Theoretical pI: Translated: 8.84; Mature: 8.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCMAYFYLALLFFFFLDHVFGWSIFDDGYISKNIFSLVFSCFLIIAFVVVSIVAVISPT CHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MCIYKVNKKVKNRYGFTGL HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFCMAYFYLALLFFFFLDHVFGWSIFDDGYISKNIFSLVFSCFLIIAFVVVSIVAVISPT CHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MCIYKVNKKVKNRYGFTGL HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA