| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919921
Identifier: 238919921
GI number: 238919921
Start: 1952026
End: 1953066
Strand: Reverse
Name: 238919921
Synonym: NT01EI_2025
Alternate gene names: NA
Gene position: 1953066-1952026 (Counterclockwise)
Preceding gene: 238919922
Following gene: 238919917
Centisome position: 51.23
GC content: 37.56
Gene sequence:
>1041_bases ATGATCCTAGAAACGGCAACAATTACATTTTATAGAATTCATAAGTGTGGCTACTACGGCTATGGAGATTTGCTCCCCGC ATTTGGTAATTGTGCTGAGATGCTGACAGATCTTGCTTCATGGGCAGAAGGGAAAAGTTTTAAGCAAACAAAGACATATG AAGGAAATGATGAGGTTTTACCAACTTATTTACTTGATATGAAGCGTGCTGATGATAACGTGGTATTACTTCTTTGGAAT GAAGTACCCTCTACAGATCAAAGTGTTCCATCCGTACAGGCAGATGCGGAATTTGGAGAGAGTCCAGATGTTATACTGAA TTCGATCGAACCAGGTAGTATTCCAGGATTTGCAACTTATTTTTGGTTCGTTCCATCCATGAATTTGGTGGCAAGTATTA AACTTAATCATGCTCTAACTGGCCAAAAAGCAATGCAGGTTTATCTCCATAGCTTTTTAAAACAGTCATCGAGTCATGTT GTGGCAGAAATGACAGATCAAGCAGATGGTACATATGATATTGTAATTAAAGGTTATAAAGTTAATCCTGATGATGATTC TTTGCCAAAGAAAAAACACCGACCACAATTTTCAGTTGGTTTAGTAAGAAATCCTGGAAAACATGATTTTATTAGACAGC GAGCTAATAGCGTGTCAAAGATTGAAAAAATAGTTGAATTGGATGTGTCTAAAGCTGAGGATTATAGCCTTTGGCAAAAA CTATTAATTGGTATGCGTGTCAGTCAAGCACAATCAAGTGATGTGTCAACAAAGATAAAATATGAGCTTTCTCCGGAAGT AGATATTGATGATATCAATGGAATGATTGATGATTGGAATGATAATCATGATACTAATTCTTGCGACTATGGATTTACTT TCTCTGGTGATTCAAAGACATATTGGTTAAGTCGCTCATTGGCTAGAACTCAATTTCCTTTAAACTTAGAGCGTCGGAAT GCTGAGTTTGTAACATCCGCCTCTCTTCTCAATGAACTTGTTGGTAAGAGGGAGCTCATATTGCGTGAGGCCGGAGTTTA G
Upstream 100 bases:
>100_bases GTATATGTATACAGTTTATATATGGCTAAATAACCAGTATCCCATTTTTAGAGAGTTGGTATTAAATTAGGATCTTTCCC TACTTATTGGATGAGAGTTT
Downstream 100 bases:
>100_bases ATGAAAATATTAAGTGGTATATTCCTTTTTGCTATTTTGATTGCTTCTGCCTATTTTGGAAGGAATGTGCCATTTTCATC CCAATGGCCTCTTTATGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 346; Mature: 346
Protein sequence:
>346_residues MILETATITFYRIHKCGYYGYGDLLPAFGNCAEMLTDLASWAEGKSFKQTKTYEGNDEVLPTYLLDMKRADDNVVLLLWN EVPSTDQSVPSVQADAEFGESPDVILNSIEPGSIPGFATYFWFVPSMNLVASIKLNHALTGQKAMQVYLHSFLKQSSSHV VAEMTDQADGTYDIVIKGYKVNPDDDSLPKKKHRPQFSVGLVRNPGKHDFIRQRANSVSKIEKIVELDVSKAEDYSLWQK LLIGMRVSQAQSSDVSTKIKYELSPEVDIDDINGMIDDWNDNHDTNSCDYGFTFSGDSKTYWLSRSLARTQFPLNLERRN AEFVTSASLLNELVGKRELILREAGV
Sequences:
>Translated_346_residues MILETATITFYRIHKCGYYGYGDLLPAFGNCAEMLTDLASWAEGKSFKQTKTYEGNDEVLPTYLLDMKRADDNVVLLLWN EVPSTDQSVPSVQADAEFGESPDVILNSIEPGSIPGFATYFWFVPSMNLVASIKLNHALTGQKAMQVYLHSFLKQSSSHV VAEMTDQADGTYDIVIKGYKVNPDDDSLPKKKHRPQFSVGLVRNPGKHDFIRQRANSVSKIEKIVELDVSKAEDYSLWQK LLIGMRVSQAQSSDVSTKIKYELSPEVDIDDINGMIDDWNDNHDTNSCDYGFTFSGDSKTYWLSRSLARTQFPLNLERRN AEFVTSASLLNELVGKRELILREAGV >Mature_346_residues MILETATITFYRIHKCGYYGYGDLLPAFGNCAEMLTDLASWAEGKSFKQTKTYEGNDEVLPTYLLDMKRADDNVVLLLWN EVPSTDQSVPSVQADAEFGESPDVILNSIEPGSIPGFATYFWFVPSMNLVASIKLNHALTGQKAMQVYLHSFLKQSSSHV VAEMTDQADGTYDIVIKGYKVNPDDDSLPKKKHRPQFSVGLVRNPGKHDFIRQRANSVSKIEKIVELDVSKAEDYSLWQK LLIGMRVSQAQSSDVSTKIKYELSPEVDIDDINGMIDDWNDNHDTNSCDYGFTFSGDSKTYWLSRSLARTQFPLNLERRN AEFVTSASLLNELVGKRELILREAGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38909; Mature: 38909
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILETATITFYRIHKCGYYGYGDLLPAFGNCAEMLTDLASWAEGKSFKQTKTYEGNDEVL CEEEEEEEEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PTYLLDMKRADDNVVLLLWNEVPSTDQSVPSVQADAEFGESPDVILNSIEPGSIPGFATY HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHH FWFVPSMNLVASIKLNHALTGQKAMQVYLHSFLKQSSSHVVAEMTDQADGTYDIVIKGYK HHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEEEE VNPDDDSLPKKKHRPQFSVGLVRNPGKHDFIRQRANSVSKIEKIVELDVSKAEDYSLWQK ECCCCCCCCCHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LLIGMRVSQAQSSDVSTKIKYELSPEVDIDDINGMIDDWNDNHDTNSCDYGFTFSGDSKT HHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCE YWLSRSLARTQFPLNLERRNAEFVTSASLLNELVGKRELILREAGV EEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCC >Mature Secondary Structure MILETATITFYRIHKCGYYGYGDLLPAFGNCAEMLTDLASWAEGKSFKQTKTYEGNDEVL CEEEEEEEEEEEEEECCCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC PTYLLDMKRADDNVVLLLWNEVPSTDQSVPSVQADAEFGESPDVILNSIEPGSIPGFATY HHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHH FWFVPSMNLVASIKLNHALTGQKAMQVYLHSFLKQSSSHVVAEMTDQADGTYDIVIKGYK HHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEEEEE VNPDDDSLPKKKHRPQFSVGLVRNPGKHDFIRQRANSVSKIEKIVELDVSKAEDYSLWQK ECCCCCCCCCHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH LLIGMRVSQAQSSDVSTKIKYELSPEVDIDDINGMIDDWNDNHDTNSCDYGFTFSGDSKT HHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCE YWLSRSLARTQFPLNLERRNAEFVTSASLLNELVGKRELILREAGV EEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA